AMCG00002532


Basic Information

Item Value
gene id AMCG00002532
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 18058532 ~ 18062065 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002532
ATGAACAGTGGAATCTGTGTCTGCGTTTTACTGGCTGTGTTCTCGACAACCTGCTTGGGTCGTCCGTCGGCGGGCTCCGAAGATGAGGGAATCCCAGCCACAGCACAGCTCGACCAGGGCCTGTCAGGACAGCACCGGCACGTCCGCTCAGCTCCATCTAACGGTCAGCTGAAGCCTTTCATTAAGGGGGATGAGAGCCTGGAGGAAAGAACCAACCTGGGGGAGCTGCTGGCAAGATTGATATCTAGGAAAGGATCCTTTCGTAGAAACTCCACAATGAACAATAAGGCAGGCAGCATGAGCGCCAACCACAGGATAAAAGACAGAGACTACCTGGGATGGATGGACTTTGGCCGCCGCAGTGCTGAAGAATATGAATATTCATCATAA

Function

GO:

id name namespace
GO:0030252 growth hormone secretion biological_process
GO:0007631 feeding behavior biological_process
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05226 CCK; cholecystokinin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002532 True 390 mRNA 0.53 2 18058532 18062065

Neighbor

gene id symbol gene type direction distance location
AMCG00002531 NA coding downstream 155722 17876005 ~ 17902810 (-)
AMCG00002530 NA coding downstream 201464 17838579 ~ 17857068 (-)
AMCG00002523 NA coding downstream 373235 17678022 ~ 17685297 (-)
AMCG00002520 LOC107710314 coding downstream 451583 17598649 ~ 17606949 (-)
AMCG00002521 cpne4a,LOC108425151,LOC107710314,LOC107602385,LOC107654757 coding downstream 485543 17558828 ~ 17572989 (-)
AMCG00002536 trim71,LOC107657583,LOC107551222,LOC107723073,LOC107601676,LOC107704101,LOC107751884 coding upstream 110066 18172131 ~ 18182627 (-)
AMCG00002539 trim71 coding upstream 141312 18203377 ~ 18204483 (-)
AMCG00002537 NA coding upstream 153730 18215795 ~ 18224850 (-)
AMCG00002538 NA coding upstream 164903 18226968 ~ 18241221 (-)
AMCG00002542 NA coding upstream 258074 18320139 ~ 18335125 (-)
G123845 NA non-coding downstream 6200 18051097 ~ 18052332 (-)
G123824 ctnnb1 non-coding downstream 243066 17811518 ~ 17815466 (-)
G123788 NA non-coding downstream 383422 17660067 ~ 17675110 (-)
G123705 NA non-coding downstream 819988 17234370 ~ 17238544 (-)
G123646 NA non-coding downstream 982983 17075312 ~ 17075549 (-)
G123876 NA non-coding upstream 143603 18205668 ~ 18206132 (-)
G123926 NA non-coding upstream 407169 18469234 ~ 18469607 (-)
G123961 NA non-coding upstream 522644 18584709 ~ 18585930 (-)
G123981 NA non-coding upstream 720080 18782145 ~ 18782366 (-)
G124068 NA non-coding upstream 1221813 19283878 ~ 19284293 (-)
AMCG00002533 ulk4,LOC107704090 other downstream 16959 17933464 ~ 18041573 (-)
G123829 NA other downstream 69067 17922452 ~ 17989465 (-)
AMCG00002524 NA other downstream 352243 17690008 ~ 17706289 (-)
AMCG00002503 NA other downstream 1084231 16958162 ~ 16974301 (-)
G123585 NA other downstream 1218810 16836156 ~ 16839722 (-)
AMCG00002584 NA other upstream 3584990 21647055 ~ 21678545 (-)
AMCG00002596 NA other upstream 3839227 21901292 ~ 21902597 (-)
G124719 NA other upstream 5023929 23085994 ~ 23296115 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other upstream 5119856 23181921 ~ 23192656 (-)
G124829 NA other upstream 6199500 24261565 ~ 24261823 (-)

Expression


Co-expression Network