AMCG00003465


Basic Information

Item Value
gene id AMCG00003465
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 4350519 ~ 4366232 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003465
GTGGCTGGTAGAAATAGGAAAACGTATACAATGAAAACTCGATTAAGTTCAACAATTGCTCATGACTCCTCCGGTGCCCTCTCGGATGTATCGCACCAGCGAGGCTTTAAACTTGACCACTGCCTCCTTCTCCGCGGTGTGAGGATGTGCGCGGAGTAGCATCGCAGCGCGGACCGACAGCGGGGAAGCGggcttgtttttgtgtgagcGGACACGGGTTGTCTACCGTAGTAATTTGTTAGCTACAGTAGTGTAAGTGGCGGATCGCACATCTTAAACAGACTGGCTAACATAAATGCACATTGGGGGAAGGTGTGTGAGGCTGACAGGTGTGGGAACTACATAAAAGCTGCAGTTGTGCGAGATCCTTGCAGCACTCCATTGAAAAGTTGGATTATTTCAATACACGTGTgtggaatacatttaatacgATATAGACGTTTctgattgcatttgttttgaaagacaTTGCATAGGGTGATCTCGCCATGCAGCCGCCGGAGTAGCTCCCCTGAATGCGGAACAAAGCTTGGCCGTGGCCGGGTGACATGTTCCCAAGCTGGAGCCAGTGGTGCCTGCAGTGACAACACGGACAGGAAGAGCAGAGCTGCTGCACAGGGATGAGCTGAGTCCCACCGCCCGAGAGAACAGCGTGCGGAAGCGAGAAGACTGGCCGGAAAATGCCCAGAAGGAAACAATCTAACCCACAACCGGTGAAATTGGATTCTGAAGATGGATTAGGGGTGGAGAATGCTGGGAGCCTCGTCTTGGAGAGTGACTTCCTCCTGGGTCAGGATCTGGAGTTTGGGGACAGCGACGACAAGATCATCGGATTCGAGAGGGACTCAGAAGACTCAGTTGCGGCGGAGATCGTCATCCCCGTGTACTCGCTGAGCGATGACGACTGCTCCAGCTACAACCGGCTCAGCATGGAGAGCGACGCTGAGGACCCCCGCGACACCGAGAGCGACCGGGAGGACCACCACGAGCACACGCTACAGCACTACCTCTCCTGCAAGCAGTGTGGCCAGCTGCTGGACGGCTCCCTGGGGGGGCTGGAGCTCAGCGCCCCCTACTGCCTGAAGTGCGGAGACGGGGGCGAGGGGAGCTACGGCGAGGGAGACGAGACGCCCTCCGACTCGAACACCCCAGCCTCCCGGGAGAACCGTGGCTCGGACGGCGGCGCGCGTAAGATCTACTCCTGCAAGCTGTGCAGCTTCTCCTCGCGCTACTCCAACCACCTGAAGCGGCACATGAAGACGCACAACGGCGAGAAGCCCTTCAAGTGCCCGCACTGCGCCTATGCCTCCGCCCAGCTGGTCAACTTACAGCGGCACGTGCGCACGCACACAGGCGAGAAGCCCTTCAAGTGCGAGTTCTGCGCCTTCGCCTGCAACTCGCTGGGCAATCTCAAGAGGCACGAGCGCATGCACACGCAGGACAAGCTCAACAAGTGCAGCCTGTGTGACTACCACGCCAGCAACGGCCGCAGCCTCAAGCGCCACGCCATGGGCCACGAGGCCGAGGAGCCCACGGGTGCCTCCGAAGATGCCGTGGTTTCTGACCTGACCCTCCATGTCAGCAGCAGCAACGACTTCCTCCAGAGCTACCCCAGCCTGAAGCCCGAGATGGACCCCCGCAGCCTCCTGGACACCGAGGGGGTCCCGGAGGAGACGGACACCCTTCCCGAGCTCCTGTTCCCCTTCACCTGCCGGCTGTGTGGCCTGGTCCTGGACGATGGCTTCATGCACGAGGACGGCTCGTCCAACCAGATCTGCAGCAAGTGCGGCCTGGAGCTGCTCTCCAAGGAGGACCCCGGCGGCGCAGAGAAGTCCGACAAGTTGTACCGGCACCTGCAGGCGGATCAGGGTCTTCTGGGCAACGCGTGGGGGGTCCCAGGGAGAACGAGGATTGGAATAAGGGGAGGTGATAACTGCATGGGCGCCTGGCGGAAGTCCAGGAAGACGCCGCACTGA

Function

GO: NA

KEGG:

id description
K24373 ZNF513; zinc finger protein 513

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003465 True 1976 mRNA 0.59 5 4350519 4366232

Neighbor

gene id symbol gene type direction distance location
AMCG00003463 NA coding upstream 60571 4280112 ~ 4289948 (+)
AMCG00003457 fndc4,LOC107589087 coding upstream 281457 4065461 ~ 4069062 (+)
AMCG00003458 LOC107561937,LOC107746353,LOC107723530,LOC107589087,LOC107701471 coding upstream 310517 4035185 ~ 4040002 (+)
AMCG00003453 NA coding upstream 343034 3957571 ~ 4007485 (+)
AMCG00003455 NA coding upstream 393007 3901725 ~ 3957512 (+)
AMCG00003467 eif2b4 coding downstream 61479 4427711 ~ 4435467 (+)
AMCG00003474 NA coding downstream 105105 4471337 ~ 4471731 (+)
AMCG00003468 NA coding downstream 175411 4541643 ~ 4543761 (+)
AMCG00003475 NA coding downstream 323252 4689484 ~ 4695337 (+)
AMCG00003478 LOC108428732,LOC107594120,LOC107734000,LOC107552030,LOC106571024,LOC103363535 coding downstream 808783 5175015 ~ 5187273 (+)
G646 NA non-coding upstream 260200 4086896 ~ 4090319 (+)
G642 NA non-coding upstream 374480 3975753 ~ 3976039 (+)
G515 NA non-coding upstream 984176 3339846 ~ 3366343 (+)
G454 NA non-coding upstream 1292318 3006968 ~ 3058201 (+)
G445 NA non-coding upstream 1391088 2957218 ~ 2959431 (+)
G742 NA non-coding downstream 117658 4483890 ~ 4484270 (+)
G752 NA non-coding downstream 186666 4552898 ~ 4553645 (+)
G907 kbtbd11 non-coding downstream 1184513 5550745 ~ 5556306 (+)
G908 NA non-coding downstream 1191375 5557607 ~ 5558515 (+)
G960 NA non-coding downstream 1463227 5829459 ~ 5829745 (+)
AMCG00003473 NA other downstream 86332 4452564 ~ 4455142 (+)
AMCG00003469 NA other downstream 147799 4514031 ~ 4522400 (+)
AMCG00003480 NA other downstream 937218 5303450 ~ 5334752 (+)
G1012 NA other downstream 2121460 6487692 ~ 6494905 (+)
AMCG00003524 rps7,LOC107668222 other downstream 3131808 7498040 ~ 7504015 (+)

Expression


Co-expression Network