AMCG00003468


Basic Information

Item Value
gene id AMCG00003468
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 4541643 ~ 4543761 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003468
ATGCGGGCTTATATCTTGGCTCGAGAGAACGCTGTTCGCGGGTGGCGGGAGCTGATGGGACCCACCAGAGTTTTCCAAGCTCGATATACAGCCCCTGAGACCATACGCGGCATCTACGGACTCACTGATACCAGGAATACCACACACGGCTCAGACTCAGAGGAGTCGGCCGCGCGGGAGATTGCCTTCTTCTTCCCCGAGTTCAGTGTGAAGCAGTGGATGGAGAAGGAAGAGCCTCTGTTCAGGGCTGGGTGTGTTGTTTACGACCAGCAGAAGCAGATTCACACCCTCAAAGAAGAGTTTCTGCCATGA

Function

GO: NA

KEGG:

id description
K00940 ndk, NME; nucleoside-diphosphate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003468 True 312 mRNA 0.55 2 4541643 4543761

Neighbor

gene id symbol gene type direction distance location
AMCG00003474 NA coding upstream 69912 4471337 ~ 4471731 (+)
AMCG00003467 eif2b4 coding upstream 106176 4427711 ~ 4435467 (+)
AMCG00003465 NA coding upstream 175411 4350519 ~ 4366232 (+)
AMCG00003463 NA coding upstream 251695 4280112 ~ 4289948 (+)
AMCG00003457 fndc4,LOC107589087 coding upstream 472581 4065461 ~ 4069062 (+)
AMCG00003475 NA coding downstream 145723 4689484 ~ 4695337 (+)
AMCG00003478 LOC108428732,LOC107594120,LOC107734000,LOC107552030,LOC106571024,LOC103363535 coding downstream 631254 5175015 ~ 5187273 (+)
AMCG00003481 NA coding downstream 791730 5335491 ~ 5339847 (+)
AMCG00003485 NA coding downstream 835267 5379028 ~ 5402540 (+)
AMCG00003487 NA coding downstream 919998 5463759 ~ 5506907 (+)
G742 NA non-coding upstream 57373 4483890 ~ 4484270 (+)
G690 NA non-coding upstream 161824 4326653 ~ 4379819 (+)
G684 NA non-coding upstream 166704 4296559 ~ 4374939 (+)
G646 NA non-coding upstream 451324 4086896 ~ 4090319 (+)
G642 NA non-coding upstream 565604 3975753 ~ 3976039 (+)
G752 NA non-coding downstream 9137 4552898 ~ 4553645 (+)
G907 kbtbd11 non-coding downstream 1006984 5550745 ~ 5556306 (+)
G908 NA non-coding downstream 1013846 5557607 ~ 5558515 (+)
G960 NA non-coding downstream 1285698 5829459 ~ 5829745 (+)
G983 NA non-coding downstream 1411843 5955604 ~ 5955820 (+)
AMCG00003469 NA other upstream 19243 4514031 ~ 4522400 (+)
AMCG00003473 NA other upstream 86501 4452564 ~ 4455142 (+)
AMCG00003480 NA other downstream 759689 5303450 ~ 5334752 (+)
G1012 NA other downstream 1943931 6487692 ~ 6494905 (+)
AMCG00003524 rps7,LOC107668222 other downstream 2954279 7498040 ~ 7504015 (+)
AMCG00003534 id2,LOC106566577 other downstream 4105364 8649125 ~ 8652470 (+)
AMCG00003541 asap2,LOC106566627 other downstream 4356695 8900456 ~ 8941751 (+)

Expression


Co-expression Network