AMCG00003499


Basic Information

Item Value
gene id AMCG00003499
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 6375259 ~ 6376299 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003499
ATGATATCCATTGTTCACCGCATACACCACCACAGGAGAAGATATACCACAAGGGTTCACACTGAACGCCCCAAACCACTTGAAGAGCATACAAATGATGAACTTCATGCAAGATTTAGATTTGGTCGGGAGGACATTCAGTTCATTACCAATGTACTTCAACCGCATCTGGAACACACCACTCAAAGAAGTTATGCCTTGACTGTTGACGAACAGGTCCTTATGGCTTTGCGCTTCTATGCATTTGGAGCATTTTACCAAGTCATTGGAGACAGTTTGCGCCTCCATAAATCCACAATCAGTTCCTTGGTACACAGAGTTTCCTCTGCATTGGCCAGCCTTGTCAgccaGGAGAGTAATATCTTCCAAATATTTCAACAAAACCCCCCAGAGGGCATTATACTAGGTGACAGTGCGTACCCACTCTTACCATGGCTAATGACAGCTTTTGCCACAGCAAGCACTGATGCAGAGGAAAGATTCAACAGCGCCCATGGAACAACCAGGAGCACAATTGAGCGCCTAAATGGAGTGTTGAAGAGGCGCTTTGCATGTCTGAACTACCTAAGTGTTGAGCCACAGCGAGCATGCAACATAATTCTCACCTGTATTGTCCTTCATAACATAGCTCAAACACGCAAAGTTCCTCTCCATGATGACAGTGGTGATCTTCCACAGCCCCAAGTGGATGGCCCTGACACACCACTCCCAGCATTGCAGCTGTATGGACGAGCTGGAAGGTCAATGAGAGATGCTCTAGTGaacctttattattaa

Function

GO:

id name namespace
GO:0046031 ADP metabolic process biological_process
GO:0006090 pyruvate metabolic process biological_process
GO:0006091 generation of precursor metabolites and energy biological_process
GO:0006096 glycolytic process biological_process
GO:0006165 nucleoside diphosphate phosphorylation biological_process
GO:0017144 drug metabolic process biological_process
GO:0046939 nucleotide phosphorylation biological_process
GO:0009132 nucleoside diphosphate metabolic process biological_process
GO:0009135 purine nucleoside diphosphate metabolic process biological_process
GO:0006757 ATP generation from ADP biological_process
GO:0042866 pyruvate biosynthetic process biological_process
GO:0009179 purine ribonucleoside diphosphate metabolic process biological_process
GO:0009185 ribonucleoside diphosphate metabolic process biological_process
GO:0016052 carbohydrate catabolic process biological_process

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003499 True 777 mRNA 0.46 2 6375259 6376299

Neighbor

gene id symbol gene type direction distance location
AMCG00003500 NA coding upstream 107752 6266901 ~ 6267507 (+)
AMCG00003496 NA coding upstream 459667 5914471 ~ 5915592 (+)
AMCG00003497 NA coding upstream 549527 5824581 ~ 5825732 (+)
AMCG00003498 NA coding upstream 605322 5767358 ~ 5769937 (+)
AMCG00003495 NA coding upstream 621998 5752143 ~ 5753261 (+)
AMCG00003501 NA coding downstream 244512 6620811 ~ 6646702 (+)
AMCG00003505 NA coding downstream 347231 6723530 ~ 6736370 (+)
AMCG00003506 NA coding downstream 442317 6818616 ~ 6825710 (+)
AMCG00003507 NA coding downstream 451630 6827929 ~ 6870265 (+)
AMCG00003513 NA coding downstream 663512 7039811 ~ 7040909 (+)
G990 NA non-coding upstream 388865 5986038 ~ 5986394 (+)
G983 NA non-coding upstream 419439 5955604 ~ 5955820 (+)
G960 NA non-coding upstream 545514 5829459 ~ 5829745 (+)
G908 NA non-coding upstream 816744 5557607 ~ 5558515 (+)
G907 kbtbd11 non-coding upstream 818953 5550745 ~ 5556306 (+)
G1146 NA non-coding downstream 697105 7073404 ~ 7073609 (+)
G1187 NA non-coding downstream 988645 7364944 ~ 7365477 (+)
G1218 NA non-coding downstream 1113146 7489445 ~ 7489881 (+)
G1241 NA non-coding downstream 1147562 7523861 ~ 7750465 (+)
G1242 NA non-coding downstream 1150560 7526859 ~ 7528458 (+)
AMCG00003480 NA other upstream 1040507 5303450 ~ 5334752 (+)
AMCG00003469 NA other upstream 1852859 4514031 ~ 4522400 (+)
AMCG00003473 NA other upstream 1920117 4452564 ~ 4455142 (+)
G1012 NA other downstream 111393 6487692 ~ 6494905 (+)
AMCG00003524 rps7,LOC107668222 other downstream 1121741 7498040 ~ 7504015 (+)
AMCG00003534 id2,LOC106566577 other downstream 2272826 8649125 ~ 8652470 (+)
AMCG00003541 asap2,LOC106566627 other downstream 2524157 8900456 ~ 8941751 (+)
AMCG00003544 NA other downstream 2699591 9075890 ~ 9106765 (+)

Expression


Co-expression Network