Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003516 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 7045216 ~ 7047403 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005783 | endoplasmic reticulum | cellular_component |
| GO:0031090 | organelle membrane | cellular_component |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | molecular_function |
| GO:0004497 | monooxygenase activity | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003516 | True | 279 | mRNA | 0.54 | 2 | 7045216 | 7047403 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003513 | NA | coding | upstream | 4307 | 7039811 ~ 7040909 (+) |
| AMCG00003507 | NA | coding | upstream | 174951 | 6827929 ~ 6870265 (+) |
| AMCG00003506 | NA | coding | upstream | 219506 | 6818616 ~ 6825710 (+) |
| AMCG00003505 | NA | coding | upstream | 308846 | 6723530 ~ 6736370 (+) |
| AMCG00003501 | NA | coding | upstream | 398514 | 6620811 ~ 6646702 (+) |
| AMCG00003523 | NA | coding | downstream | 361142 | 7408545 ~ 7410129 (+) |
| AMCG00003522 | trappc12 | coding | downstream | 375400 | 7422803 ~ 7438447 (+) |
| AMCG00003529 | NA | coding | downstream | 406008 | 7453411 ~ 7459476 (+) |
| AMCG00003527 | NA | coding | downstream | 419518 | 7466921 ~ 7482206 (+) |
| AMCG00003521 | NA | coding | downstream | 458060 | 7505463 ~ 7514410 (+) |
| G990 | NA | non-coding | upstream | 1058822 | 5986038 ~ 5986394 (+) |
| G983 | NA | non-coding | upstream | 1089396 | 5955604 ~ 5955820 (+) |
| G960 | NA | non-coding | upstream | 1215471 | 5829459 ~ 5829745 (+) |
| G908 | NA | non-coding | upstream | 1486701 | 5557607 ~ 5558515 (+) |
| G907 | kbtbd11 | non-coding | upstream | 1488910 | 5550745 ~ 5556306 (+) |
| G1146 | NA | non-coding | downstream | 26001 | 7073404 ~ 7073609 (+) |
| G1187 | NA | non-coding | downstream | 317541 | 7364944 ~ 7365477 (+) |
| G1218 | NA | non-coding | downstream | 442042 | 7489445 ~ 7489881 (+) |
| G1241 | NA | non-coding | downstream | 476458 | 7523861 ~ 7750465 (+) |
| G1242 | NA | non-coding | downstream | 479456 | 7526859 ~ 7528458 (+) |
| G1012 | NA | other | upstream | 550311 | 6487692 ~ 6494905 (+) |
| AMCG00003480 | NA | other | upstream | 1710464 | 5303450 ~ 5334752 (+) |
| AMCG00003469 | NA | other | upstream | 2522816 | 4514031 ~ 4522400 (+) |
| AMCG00003473 | NA | other | upstream | 2590074 | 4452564 ~ 4455142 (+) |
| AMCG00003524 | rps7,LOC107668222 | other | downstream | 450637 | 7498040 ~ 7504015 (+) |
| AMCG00003534 | id2,LOC106566577 | other | downstream | 1601722 | 8649125 ~ 8652470 (+) |
| AMCG00003541 | asap2,LOC106566627 | other | downstream | 1853053 | 8900456 ~ 8941751 (+) |
| AMCG00003544 | NA | other | downstream | 2028487 | 9075890 ~ 9106765 (+) |
| AMCG00003551 | NA | other | downstream | 2208425 | 9255828 ~ 9263468 (+) |
