Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003558 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 9538315 ~ 9540081 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003558 | True | 426 | mRNA | 0.54 | 3 | 9538315 | 9540081 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003556 | tfb1m,LOC106610789 | coding | upstream | 13870 | 9521395 ~ 9524445 (+) |
| AMCG00003557 | NA | coding | upstream | 18919 | 9511564 ~ 9519396 (+) |
| AMCG00003547 | NA | coding | upstream | 358554 | 9172738 ~ 9179761 (+) |
| AMCG00003546 | rrm2,LOC107668265 | coding | upstream | 369374 | 9165686 ~ 9168941 (+) |
| AMCG00003543 | NA | coding | upstream | 393357 | 9140544 ~ 9144958 (+) |
| AMCG00003562 | NA | coding | downstream | 220779 | 9760860 ~ 9774097 (+) |
| AMCG00003569 | prkd3,LOC101070414,LOC105015789 | coding | downstream | 280846 | 9820927 ~ 9853672 (+) |
| AMCG00003568 | LOC104960473 | coding | downstream | 326019 | 9866100 ~ 9875843 (+) |
| AMCG00003571 | foxa2,LOC105909438 | coding | downstream | 352697 | 9892778 ~ 9894988 (+) |
| AMCG00003575 | nkx2.2a,LOC103359019,LOC101157822,LOC101466937,LOC107392558 | coding | downstream | 639261 | 10179342 ~ 10181960 (+) |
| G1430 | ywhaqb,ywhaq,LOC105896734,LOC108436740,LOC107733143,LOC107674035,LOC107752793 | non-coding | upstream | 510683 | 9009297 ~ 9027632 (+) |
| G1375 | NA | non-coding | upstream | 694233 | 8843827 ~ 8844082 (+) |
| G1347 | NA | non-coding | upstream | 837761 | 8699466 ~ 8700554 (+) |
| G1343 | NA | non-coding | upstream | 871388 | 8661032 ~ 8666927 (+) |
| G1303 | NA | non-coding | upstream | 1094291 | 8443740 ~ 8444024 (+) |
| G1574 | NA | non-coding | downstream | 160476 | 9700557 ~ 9703478 (+) |
| G1706 | NA | non-coding | downstream | 696775 | 10236856 ~ 10238261 (+) |
| G1747 | ralgapa2 | non-coding | downstream | 891583 | 10431664 ~ 10457765 (+) |
| G1855 | NA | non-coding | downstream | 1510070 | 11050151 ~ 11050644 (+) |
| G1891 | NA | non-coding | downstream | 1687878 | 11227959 ~ 11228275 (+) |
| AMCG00003551 | NA | other | upstream | 274847 | 9255828 ~ 9263468 (+) |
| AMCG00003544 | NA | other | upstream | 431550 | 9075890 ~ 9106765 (+) |
| AMCG00003541 | asap2,LOC106566627 | other | upstream | 596564 | 8900456 ~ 8941751 (+) |
| AMCG00003534 | id2,LOC106566577 | other | upstream | 885845 | 8649125 ~ 8652470 (+) |
| AMCG00003524 | rps7,LOC107668222 | other | upstream | 2034300 | 7498040 ~ 7504015 (+) |
| AMCG00003570 | NA | other | downstream | 237427 | 9777508 ~ 9781756 (+) |
| AMCG00003604 | NA | other | downstream | 1921582 | 11461663 ~ 11482931 (+) |
| AMCG00003606 | NA | other | downstream | 1950104 | 11490185 ~ 11491597 (+) |
| G1989 | cnr1,LOC104936193 | other | downstream | 2033650 | 11573731 ~ 11577329 (+) |
| AMCG00003614 | NA | other | downstream | 2185002 | 11725083 ~ 11729991 (+) |
