AMCG00003693


Basic Information

Item Value
gene id AMCG00003693
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 15104744 ~ 15121566 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003693
ATGCCAACGTTTGATGAGCTTCTGGTTGGCATAGGAGATTTTGGACCATATCAGAGAAAGATATGTTTCTTAGGGTTCCTTCCAGTGACTCTCTTTGCCTTTGTTCTCATGGGGATTGTCTTCCTTGGGCATACCCCAGGTCACTGGTGTTGGACCCCAGAAGCAGAGGAAATCCAGGGCCAGTGTGGTTGGTCACAGGAGGAGTTGAGGACATTTACAATCCCCCAGTCCAGCCAGAGCTCCTACAGCCGGTGTGAGAGATTCAGTGTGGACTGGAACAGCACTGAGCTCAACTGCAGCCACCCGCTGCCCACCATCTCCATGAACTCCACCGACCGCCTTGCCTGCGACAGAGGCTGGCAGTTCGATGGATCTCACTCCACTATCGTCACTGAGTTCTCGCTTGTTTGCACAGAAGCATGGAAAACTGATCTAAACCAGGCATTTGGACGAAAGCTGTGTTTCCTTATCTCCATGATTGGACTTGGAGTCTCTGGAATGTGCGTTACATTTTCAACCAGCTACACAGTGCTGTTGCTCTTCCGCACACTGCAGGGTTTCTTTGGGAAGGGAGCGTGGACAGCTGTATATGTGCTGGTCATTGAGTTCTTTGGATCAAATAACAGAAAGTTTGTCTCCTTTGCCGCCCGGAGTTTCTTTTCCTTGGGGTTGGCCATCATTCCCGGAGTCGCCTATTTCATCACGTCCTGGAAGATGCTCCAGCTGACCATGACCCTGCCAATATTCCTGTTTTTAGCCTACTACTGGTTTGTCCCCGAATCACCTCGCTGGTTGTTGTCCCAGCAGAAGACAAAAGAAGCCATGAAGATTGTAAGAGACATTGCAAAGTACCATGGGAAGTCCTTGCCAGAAAAGTACAGTGAGGTAGAGCTTTTGGAGGAGAAGGCCAAACAGGTCATAAACCCTTCTGTTGTGGATTTATTCCAAACTCCTCAGCTTAGAAAACAGACACTCATCTTAATATATGCCTGGTTCACGAGCACTGTGGTTTTCCAAGGGTTGGTCATGCGTCTTGGACTCACAGGGGGAAACTTGTTTCTAGATTTCTTCATCGCGGCGGCGGTGGAGCTGCCTACTGGCATGGTATTTTACCTGACTGTGGGTAGAGTGGGGCGACGGCCATTACTCTTTTTCTCATATATGGTCGGAGGAATTGCCTGCTTAACAATGCTTTTCATCCCAAATGATTTCACCTGGATAAAGAAAACCATTGCGATAATTGGCAGGTTTGCTATTGCATTAGGATCTGAGACAGTGAACTTTACCAATGCTGAGCTTTTCCCCACACCATTAAGGTTAGCAAGCATATGGTTGGAGCTGCCCCTGTTAGTATACGGAGTCATGGCTTTGGTCTGCAGTGGGCTGGTTCTGCTTTTACCTGAAACAAAAGACACTGACCTACCAGAGACCATTGAAGATGTCGAGGCCCTGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003693 True 1455 mRNA 0.49 10 15104744 15121566

Neighbor

gene id symbol gene type direction distance location
AMCG00003695 NA coding upstream 8220 15065016 ~ 15096524 (+)
AMCG00003696 NA coding upstream 50373 15019408 ~ 15054371 (+)
AMCG00003691 NA coding upstream 99467 14996897 ~ 15005277 (+)
AMCG00003688 NA coding upstream 487552 14607986 ~ 14617192 (+)
AMCG00003682 NA coding upstream 523834 14564528 ~ 14580910 (+)
AMCG00003694 NA coding downstream 23056 15144622 ~ 15156393 (+)
AMCG00003703 NA coding downstream 133490 15255056 ~ 15289576 (+)
AMCG00003705 NA coding downstream 212435 15334001 ~ 15334318 (+)
AMCG00003701 LOC106607895,LOC106571478 coding downstream 231912 15353478 ~ 15370866 (+)
AMCG00003706 NA coding downstream 273247 15394813 ~ 15398406 (+)
G2517 NA non-coding upstream 74376 15006346 ~ 15030368 (+)
G2446 NA non-coding upstream 683434 14420731 ~ 14421310 (+)
G2380 NA non-coding upstream 1025417 14079112 ~ 14079327 (+)
G2336 tgfb2,LOC106584161,LOC107689010,LOC106605021,LOC107725266 non-coding upstream 1563590 13539972 ~ 13541154 (+)
G2334 NA non-coding upstream 1589679 13514660 ~ 13515065 (+)
G2571 NA non-coding downstream 7030 15128596 ~ 15130200 (+)
G2619 NA non-coding downstream 251629 15373195 ~ 15377637 (+)
G2641 NA non-coding downstream 295410 15416976 ~ 15419869 (+)
G2681 NA non-coding downstream 782917 15904483 ~ 15904820 (+)
G2698 NA non-coding downstream 911142 16032708 ~ 16032935 (+)
AMCG00003690 NA other upstream 237986 14851752 ~ 14866758 (+)
G2440 NA other upstream 685012 14418516 ~ 14419732 (+)
AMCG00003655 xdh other upstream 1897905 13155060 ~ 13206839 (+)
AMCG00003648 LOC106571761 other upstream 2062147 13025569 ~ 13042597 (+)
AMCG00003643 kif25,LOC100703631,LOC102203072 other upstream 2187742 12902566 ~ 12917002 (+)
AMCG00003702 NA other downstream 179514 15301080 ~ 15318228 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other downstream 903305 16024871 ~ 16039640 (+)
AMCG00003744 NA other downstream 1911004 17032570 ~ 17042594 (+)
G3047 NA other downstream 2560251 17681817 ~ 17683988 (+)
AMCG00003779 ctsb,catb,LOC107381178 other downstream 3010353 18131919 ~ 18142633 (+)

Expression


Co-expression Network