AMCG00004431


Basic Information

Item Value
gene id AMCG00004431
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 49519124 ~ 49522913 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004431
ATGTTAGTTGAAGTTTTGGAAGAAGATCTGAAAGCAAGCAAACCACACAGATGCACTGAGGAATCAGAGTGTGGCTCCTCACAGCCCTACAACACTCCCAGCCCTTACACATCTGTGCAGACACCCAAGGCCTGGGTACAGGAGTTTCCTGCACAGCAACCCGCTGTAGAGTACAGTCCTGATGGCAGCATTGGCAGCAGCACCCCTTCACCCCAGACTTACTGCCTCCCCACTGACTTCTCTCCAGCCAGCTCACCAGATGGCTGCGACTACTTCCATTCCCCACCCTATGAGCAGACGCCCGCCCCCTCCCCTGGCTACCCAGGAGGATATTACAGTGACAACTCGGAGGACCTGGTGTCCAGTATGTACCCTCAATTGACATATCAGGTGCCGTCACCACCAGACTCCATCTACCACAGCCCTAAGCCTCACTTCTACGAAGGATACGCAGACAGCCTCGCTGATCCTCCGGCCAACCTCAGCAACCACTATTCCTACAGGCAGAAGCAGGACTGGAATGGGCTCACCTTCTTCCACTTCCAGCTACAGAGGGAAGAGAACCTCATAAGGGGCATCTCAGATCAAGAGCTGCTGGCAGTGGACAAAAAGGGGAGAACAATGCTTCATAATGTGGTGTGTCAGGGGAAAAGAGCCCCGGTCTATGCAATTGCTAAGAGGATGGCTGCTTTGAACAGAATCAATGCCAAAGATACAGAGGGAAAGACGGCCCTGCATCTGGCTGCAGAGAAGAACCAGCATCTAATGGTGGCTGATCTAATCTCCCTCGGGGCCAATGTGAACTCAAGAGACAAGTTTGGAAAGACCTCGCTGCATCTTTGCGCAGAAAATGGATACATCAGAGTACTGGAGTGTGCAGTGATTGCAGCGAACATGGCAGTGAAAGAATTACAGAACAGCAAGACCCACAGTGAGATGAAGTTTCAAAGTCTGCGAAAGGAACAGCTCTTTGAAACGCTGGAATATCTGCTGCAAATCGGAGGGAATCTGTACACAACTGAGCAGCTCTCTGGCCATTCAGCTGTACATATTGCCGATATGGAGAACAATCCGGAGCTTGTCCACCTTCTCCAGAGACACAACTGTAAACTTGGGAACATTGACGATGAGGATTATGCCTCTCAAACAATGCTGGATGTCATGTGTAATATGGGCAGTCTGTACGAAAACCGCGAGGTGTCAGACCTGCTTCACTGTACACTGCTCAACCGGACCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004431 True 1239 mRNA 0.51 6 49519124 49522913

Neighbor

gene id symbol gene type direction distance location
AMCG00004427 NA coding upstream 89316 49425765 ~ 49429808 (+)
AMCG00004428 NA coding upstream 107557 49403208 ~ 49411567 (+)
AMCG00004426 LOC106580931 coding upstream 226056 49279160 ~ 49293068 (+)
AMCG00004422 NA coding upstream 479088 49009691 ~ 49040036 (+)
AMCG00004415 NA coding upstream 672521 48830538 ~ 48846603 (+)
AMCG00004430 LOC107598122 coding downstream 24356 49547269 ~ 49571300 (+)
AMCG00004434 NA coding downstream 85966 49608879 ~ 49631014 (+)
AMCG00004437 NA coding downstream 234208 49757121 ~ 49772253 (+)
AMCG00004441 dpagt1 coding downstream 274630 49797543 ~ 49804404 (+)
AMCG00004443 NA coding downstream 292360 49815273 ~ 49817818 (+)
G8167 NA non-coding upstream 83373 49434043 ~ 49435751 (+)
G8140 NA non-coding upstream 271090 49246488 ~ 49248034 (+)
G8111 NA non-coding upstream 489941 49024156 ~ 49029183 (+)
G8103 NA non-coding upstream 559293 48955967 ~ 48959831 (+)
G8083 NA non-coding upstream 670998 48847526 ~ 48848126 (+)
G8188 NA non-coding downstream 59205 49582118 ~ 49586095 (+)
G8356 NA non-coding downstream 543522 50066435 ~ 50068081 (+)
G8371 NA non-coding downstream 614716 50137629 ~ 50139705 (+)
G8372 cbl,LOC107601723 non-coding downstream 620392 50143305 ~ 50144990 (+)
G8373 NA non-coding downstream 622458 50145371 ~ 50145823 (+)
AMCG00004425 zbtb44,LOC106580932,LOC106612543,LOC102781915 other upstream 200289 49298736 ~ 49318835 (+)
AMCG00004424 NA other upstream 459069 49043590 ~ 49060055 (+)
AMCG00004421 NA other upstream 492769 48897117 ~ 49026355 (+)
G8099 NA other upstream 585029 48932450 ~ 48934095 (+)
G7999 NA other upstream 1371968 48146888 ~ 48147156 (+)
AMCG00004442 NA other downstream 283448 49806361 ~ 49814024 (+)
AMCG00004449 NA other downstream 415639 49938552 ~ 49951533 (+)
G8377 NA other downstream 628351 50151264 ~ 50157719 (+)
AMCG00004463 NA other downstream 713764 50236677 ~ 50243043 (+)
AMCG00004477 NA other downstream 1218475 50741388 ~ 50753432 (+)

Expression


Co-expression Network