AMCG00004532


Basic Information

Item Value
gene id AMCG00004532
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 52964213 ~ 52967709 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004532
CAGTCGGCCGCACACACTCGGCTGCAGGTAAGAAGCTCATTGCAGCTCCAAATCCTCTTTCACCTGACAGGTTTCTGTCATAATACAAGTGGTTGCTTACATCGAAGGGAAATTGCAAGCTCTGCCTTGCCAGGTCCATGTCCCCTCAGGGATCTCAGGGAGATGGGGTCTCAGATTTATGAATGATGGCTATAGAAAAGAGGTTTCCAATAGCGTCATTCATGTAGTTTTTCTCATTTGCTTCAAAATAGCTTTTAAAGTTAAAGGCTTTTCTTCAGTTGATTTCCACGTCTGTCGAAAGAAAGTGTTAGACTTGGGAAGGCTTGCCTATGGTCGAATTCTCTTGAACCAGATGAGATCTTGGAGAGGGTGATTTTCAGAGTGAAGACTGCACAgtaaccatttatttttgtccttctgtttcaaaggaaaagacaaacatGCACCTGAAAATCGTGATCCTCGCTCTGACCTTTGCCGTTGTGGCAGGCGTCAGAACTGCATTGTGGGATTACCTCAATGAAGGAGCCAATCAGGTCTCAGACAAGAGCCAGCAAACTGAAATCACCAAGGAATCGAATGGGCTGTGGAAGAACCATCTAGAGAAAATCAACCTCTACTCTCAGGACTTCCAGGAGCTACACCACAAGCTGAGCCTGGACTCGGAGAAGCTGCGGGTGCGCTTGATGCGGGAACTCCACGAGCTCAGGGAGAAGTTCTCACCATATAGCCACCAGCTGCAGCACGAGGGGGCCCAGATCCGGGACCGCCTGGCCCCCTACGCCCAACGAATGCAGGGCGTGTTCAACCGCAACACCCAGGAGCTCTGCAGTCACCTCAACACCTACATCCGGGGACTGGAGGTCAAGGCCGATGCACCCCAAGGAGACGCCCCCTACCAGGAAGTGCTACAGAGGATCGAGCAGGCGCTGGACCACAGCAACCAGAAACTGGGACCCTACCTGGAAGAGTTCAGGGTGCAGACAGCCAGGGCGGTCGGGGAGCTCCGAGAGGGGGTGCCTCCTTCGTCCACTGAGGAAGAGCTGCAGCAGCATTTGCAGGCTGTCTCTGACAGGCTGGTCCAGAATGCAGAAGGGTTCAGAGCTGGCCTCCAGGGCCGGGCTGGGGAGCTGCGGGAGGTGCTGGCCCGGCTCCTGACGTCCGCTCGGCCTCTGGGGGAAGAGTTGTCGCATAGTGTGGCCCGCTTCTGTCAGGACTCCTCCTCACAGGCCCAGCGGTTCAGCGCAGGGCTAGAGCAGCAGCTACAAGAGTTGAGCCCGGCCAGAGCATCTGTTCCCCTGGTGGAGGACTTCTCCGCCAAACTCAGCGCCCTGCTAGCGGAGATCCAGCAGAACCTGAACTGAGGTGACCAGAGCAGCGGGAGACCAAGGTGTACGTTGGCCAGGTTGTCCTGGTCATTGCTCAAAACCAGTTCAAACTCGCGGACTGAATTTAGTATCAACATGCAACATGAGAGTGCCATCTTCCCTATAGGGTATCTGTAGGTGGCTTCTTGTGCTGGCCTTGGCAGAATGTGATGGAACATGAGCCCCCAGTGTGAGTGTGACTGTGAGCAGGCAACCCAGCATGCACTGCTTCACCCAACATGCGCTGCGGTTGTGACTGCTTCCTTCAGGGTTTCATGGATTGTGACCTGGTCTTACACAGCGCTTCATGCGATTGTAAATTTGAGACCTGTTGTTGGGTGAACTGCAAAGACATCCTGTTTTGATGGTGTTGTGCCCTGTGACTGGCTTAttgttgtgttgtactgtgctggatgttcatattttccttgttttgttttgatggtGTTTATTTCATGTGAATGCATGAAGACTTTTGGtgttgcaataaaataaagaagaaatatgtaaataataacaaaactgtccagaatcattttattttgaatgatttagtCATGTGGACCAAGCATTTACATTTCACTTGAGTGAGAAGACCCCAGTGCCAGATACACAGACACTACCAGGAGATAAACAGTCTCTTAATTTCAACAGTTGTGTATTGTATGAGTTTTCCCACTGTATTACAGcagaattaattgaattataaaaCTTGTGTTTATGAGAAATGGAAGAGCATTACagctattattgttgttattactgTGGACAGAAATACTGATAATTTGTATATCTGtctatttacaataaatacgctgttttattca

Function

GO:

id name namespace
GO:0002040 sprouting angiogenesis biological_process
GO:0001525 angiogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004532 True 2194 mRNA 0.49 3 52964213 52967709

Neighbor

gene id symbol gene type direction distance location
AMCG00004534 NA coding downstream 32532 52927361 ~ 52931681 (-)
AMCG00004528 NA coding downstream 142552 52809595 ~ 52821661 (-)
AMCG00004526 LOC103129659,LOC106941049,LOC104945933,LOC107657232 coding downstream 180851 52738138 ~ 52783362 (-)
AMCG00004525 NA coding downstream 230408 52726785 ~ 52733805 (-)
AMCG00004524 NA coding downstream 298986 52623406 ~ 52665227 (-)
AMCG00004540 NA coding upstream 29403 52997112 ~ 52999812 (-)
AMCG00004539 NA coding upstream 38690 53006399 ~ 53008624 (-)
AMCG00004544 LOC107600790,LOC107577576,LOC107735118 coding upstream 149351 53117060 ~ 53150892 (-)
AMCG00004553 NA coding upstream 184162 53151871 ~ 53162352 (-)
AMCG00004552 alg9,LOC107691744 coding upstream 196964 53164673 ~ 53178444 (-)
G8833 NA non-coding downstream 409840 52553919 ~ 52554373 (-)
G8829 NA non-coding downstream 594750 52369239 ~ 52369463 (-)
G8795 NA non-coding downstream 760533 52203194 ~ 52203680 (-)
G8776 NA non-coding downstream 795672 52168340 ~ 52168541 (-)
G8769 NA non-coding downstream 801131 52116880 ~ 52163082 (-)
G8981 NA non-coding upstream 134192 53101901 ~ 53104836 (-)
G9002 NA non-coding upstream 180056 53147765 ~ 53147974 (-)
G9048 NA non-coding upstream 313342 53281051 ~ 53284971 (-)
G9074 NA non-coding upstream 525786 53493495 ~ 53493710 (-)
G9141 NA non-coding upstream 694675 53662384 ~ 53663246 (-)
G8937 NA other downstream 12826 52946812 ~ 52951387 (-)
AMCG00004533 NA other downstream 52461 52898759 ~ 52911752 (-)
AMCG00004529 bco2 other downstream 90105 52850483 ~ 52874108 (-)
G8761 NA other downstream 892627 52068053 ~ 52071586 (-)
G8760 NA other downstream 898331 52065526 ~ 52065882 (-)
AMCG00004551 NA other upstream 211313 53179022 ~ 53189393 (-)
AMCG00004567 NA other upstream 718707 53686416 ~ 53863369 (-)
AMCG00004575 NA other upstream 1064925 54032634 ~ 54043428 (-)
AMCG00004590 LOC106612637 other upstream 1388751 54356460 ~ 54373627 (-)
AMCG00004598 NA other upstream 1474062 54441771 ~ 54450341 (-)

Expression


Co-expression Network