XLOC_000596 (cryzl1)


Basic Information

Item Value
gene id XLOC_000596
gene name cryzl1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 47089501 ~ 47105214 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001025
GACCGTTGGAGTGACCGTTGCAGAGCATATGCTAGTGTATGGAGACGAAGCGCGCCCTGAAATCCTACAgattcctcctcctcctcctcccgcAGTCACTGTCATAAAAAGGACAATCGGCCTGAGCTCAAAAACAGTCTTCTTACCTCATCATTCAGTTTCCATTATGACTCCAGCACTCTGCGAGGGAATCAACTAAAGGGGCATGAGGTGACAGGCGGAGGCTCTTCTGTCCTTTTTTGACGCTCGAGAGTTTACCCACTAACATTGGCAACCATCAGGTCAAAGTTCAAGTAAAGAGCTGTGCACTAAGTCCAGTTGATTTTAAgATGTATGAAGACCTCAAGCTTGAGAAGGAGCATGTTCCAGTTGGAAGGGAGATCGCTGGGGTTGTTCTTCAAGTGGGACCCAAAGTGATGTTTTTCCAACCAGACGATGAGGTTGTGGGGATTCTCCCATTGGATGCTGAGCAGTCTGGCCTTTGTTCAGTCGTGCTTATTGACGAATTTAATCTAGTTCCGAAGCCGGAGAAAGTGAGCTGGTTTGAAGCAGCAGCGGTAATTAAAGATGGTCTCAGGGCCTACACCGCTCTTCATACGCTGGCACGAATGGCAGCAGGACAGACTGTACTGGTGCTGGATGGGGCGTCT
>TCONS_00003142
GACCGTTGGAGTGACCGTTGCAGAGCATATGCTAGTGTATGGAGACGAAGCGCGCCCTGAAATCCTACAgattcctcctcctcctcctcccgcAGTCACTGTCATAAAAAGGACAATCGGCCTGAGCTCAAAAACAGTCTTCTTACCTCATCATTCAGTTTCCATTATGACTCCAGCACTCTGCGAGGGAATCAACTAAAGGGGCATGAGGTGACAGGCGGAGGCTCTTCTGTCCTTTTTTGACGCTCGAGAGTTTACCCACTAACATTGGCAACCATCAGGTCAAAGTTCAAGTAAAGAGCTGTGCACTAAGTCCAGTTGATTTTAAgATGTATGAAGACCTCAAGCTTGAGAAGGAGCATGTTCCAGTTGGAAGGGAGATCGCTGGGGTTGTTCTTCAAGTGGGACCCAAAGTGATGTTTTTCCAACCAGACGATGAGGTTGTGGGGATTCTCCCATTGGATGCTGAGCAGTCTGGCCTTTGTTCAGTCGTGCTTATTGACGAATTTAATCTAGTTCCGAAGCCGGAGAAAGTGAGCTGGTTTGAAGCAGCAGCGGTAATTAAAGATGGTCTCAGGGCCTACACCGCTCTTCATACGCTGGCACGAATGGCAGCAGGACAGACTGTACTGGTGCTGGATGGGGCGTCTCCCTTTGGAGTTCTGGCCATTCAGCTTGCCCACTATCACGGTGTAAAAGTCTTGGCTACAGCTTTGTCCCCGGAGGACCAGAAGTTTTTGCAAGAGCTGCGGCCGAATGTGGCTCGAGTGATCAGATTGTGGGACGCAAAGGAGGATTTGGTGGACTCGTGCCTTGAAGAGACTGGAGGTCTTGGAGTGGACATCATCGTTGATTCAGGAGTGAGACTCTATGATGAAGAGCCAGAAGCACAGACGAAACAGCCACATAAACACGACCTCCTCACCCTGCTTTCAGTTGGAGGTCATTGGGTCACCACAGAACAGCACTTACAGCTGGACCCTCCCGACAGCCACATTCTCTTCCTGAAGGCAGCATCGCTCTCATTTCTTAATGATGAAGTGTGGACAGTGTCCCGTGCCAAGCAGGGCCGATATCTTCGTATCTTTTCCTATAAAGTTCATTAAAATcgaacatttatatttaatatgaaatatttattgaTATAATAACACTGCTTTCTAATTGGTCCAGTTGTAATATAGTGCATTAAGGTCTTGGCTTTGTTTCTCTCAATATTTCTAGATCTGTAATGTTGCAGCCAGTTTAT
>TCONS_00001026
ACTCATTTCGAGTCACGTGcaggaaatgaacaaaacactaCCGCAGTCAGTCAGCTACAGGCAAATATATATCATACATCATAACAGATGCAGATATTTTATCACCGATCTTGGCGTTTTTAACAGAGACACGCCAGTTATAGAAGGGAAAACAATAGCTTAGATGCTTTACAAGGATGACGTATTCCGGTTGATTTGGACCTTGAGTTTTTGAGTTAGCAGAAAAGATTTAAAGCATGCATTAAATGACATTCAAGTATTATTTCAATATAAAGTATTACGGAATTCAGGTTGTTGCTATTACTTGTATTACCTGTTAAGTGGGCATTAGTCGATTTAAATACAGCTAGAATTGCCATGAAGGGACTTTACTGCAAACCAGGAGACCAAGAAGATGTCAAGTTTGTCTTACAGGAGACGAGTTTACCCACTAACATTGGCAACCATCAGGTCAAAGTTCAAGTAAAGAGCTGTGCACTAAGTCCAGTTGATTTTAAgATGTATGAAGACCTCAAGCTTGAGAAGGAGCATGTTCCAGTTGGAAGGGAGATCGCTGGGGTTGTTCTTCAAGTGGGACCCAAAGTGATGTTTTTCCAACCAGACGATGAGGTTGTGGGGATTCTCCCATTGGATGCTGAGCAGTCTGGCCTTTGTTCAGTCGTGCTTATTGACGAATTTAATCTAGTTCCGAAGCCGGAGAAAGTGAGCTGGTTTGAAGCAGCAGCGGTAATTAAAGATGGTCTCAGGGCCTACACCGCTCTTCATACGCTGGCACGAATGGCAGCAGGACAGACTGTACTGGTGCTGGATGGGGCGTCTCCCTTTGGAGTTCTGGCCATTCAGCTTGCCCACTATCACGGTGTAAAAGTCTTGGCTACAGCTTTGTCCCCGGAGGACCAGAAGTTTTTGCAAGAGCTGCGGCCGAATGTGGCTCGAGTGATCAGATTGTGGGACGCAAAGGAGGATTTGGTGGACTCGTGCCTTGAAGAGACTGGAGGTCTTGGAGTGGACATCATCGTTGATTCAGGAGTGAGACTCTATGATGAAGAGCCAGAAGCACAGACGAAACAGCCACATAAACACGACCTCCTCACCCTGCTTTCAGTTGGAGGTCATTGGGTCACCACAGAACAGCACTTACAGCTGGACCCTCCCGACAGCCACATTCTCTTCCTGAAGGCAGCATCGCTCTCATTTCTTAATGATGAAGTGTGGACAGTGTCCCGTGCCAAGCAGGGCCGATATCTTCATATCTTGAAGGATGTGATGAATAAACTCTGCATGGGGACTTTTAGGCCACAGATGGAGCACCCCGTGCCTTTATATGAAGCTACTGTCTCGATGGAGATGGTACAGAGGAAGCAAGTGAGGAAGAGAATAGTCGTCAAGCTTTGAAAAGCACTTCTAAATATTCTGTTCAGTTTATATTGTTTTGATTCTCATCATGTTTTATTTGACATAAAGCCGACAACTGCACATTTCTGTTCCTATTTCAAATCATTTCACGAAAACAATGAAATCACAAATGTACATTATTACACGCTAAATGTAAAGTGTTCTGCCATAATAAACCTCTGAAGATATTTACATGAAACATTTTTGCTAAGCAACTCGAATTTTGACCCACTGTAGATGTGATTTTGTTTTCCTTCTCAAGCATTCCCTATGGATTATTAATGGCACCATCTGATCCCGTGTCTCCTGGCTATTAATGTGGGCAGCGCTGTGTGGAAAAGAGCCAATAATAGTGACTTGGAATCTTGCATCATTGTTCAAAGTATGCATCTGATTATTAGTAGTCTCTCATTAAGACTCTCAAGATAATCCTTGCTTGCTTTCAAAAGGAGAGATGTGTTTGTTAGGATCCCATTGTCCTAAATGTGCTATTGACATCTTGGCCAAATTCCCAAATTGTCGCATAAATATCAAGGAGAAAGATTAATTAAACTCTGAAATCCCACTTGGACAAAATCAAA
>TCONS_00001027
TGGCAGCAGGACAGACTGTACTGGTGCTGGATGGGGCGTCTCCCTTTGGAGTTCTGGCCATTCAGCTTGCCCACTATCACGGTGTAAAAGTCTTGGCTACAGCTTTGTCCCCGGAGGACCAGAAGTTTTTGCAAGAGCTGCGGCCGAATGTGGCTCGAGTGATCAGATTGTGGGACGCAAAGGAGGATTTGGTGGACTCGTGCCTTGAAGAGACTGGAGGTCTTGGAGTGGACATCATCGTTGATTCAGGAGTGAGACTCTATGATGAAGAGCCAGAAGCACAGACGAAACAGCCACATAAACACGACCTCCTCACCCTGCTTTCAGTTGGAGGTCATTGGGTCACCACAGAACAGCACTTACAGCTGGACCCTCCCGACAGCCACATTCTCTTCCTGAAGGCAGCATCGCTCTCATTTCTTAATGATGAAGTGTGGACAGTGTCCCGTGCCAAGCAGGGCCGATATCTTCGTATCTTTTCCTATAAAGTTCATTAAAATcgaacatttatatttaatatgaaatatttattgaTATAATAACACTGCTTTCTAATTGGTCCAGTTGTAATATAGTGCATTAAGGTCTTGGCTTTGTTTCTCTCAATATTTCTAGATCTGTAATGTTGCAGCCAGTTTAT

Function

symbol description
cryzl1 Predicted to enable oxidoreductase activity. Orthologous to human CRYZL1 (crystallin zeta like 1).

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040718-378 Predicted to enable oxidoreductase activity. Orthologous to human CRYZL1 (crystallin zeta like 1).

Ensembl:

ensembl_id ENSDARG00000026902

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001025 False 650 processed_transcript 0.49 6 47089501 47095865
TCONS_00003142 False 1249 lncRNA 0.47 10 47089501 47101796
TCONS_00001026 False 1976 mRNA 0.43 12 47091468 47105214
TCONS_00001027 True 640 processed_transcript 0.46 5 47095825 47101796

Neighbor

gene id symbol gene type direction distance location
XLOC_000595 NA coding upstream 125273 46959902 ~ 46964228 (+)
XLOC_000594 tmprss3b coding upstream 132150 46948010 ~ 46957351 (+)
XLOC_000593 CU986305.1 coding upstream 243825 46827891 ~ 46845676 (+)
XLOC_000592 NA coding upstream 353385 46735728 ~ 46736116 (+)
XLOC_000591 NA coding upstream 362544 46719096 ~ 46726957 (+)
XLOC_000597 NA coding downstream 47976 47153190 ~ 47155997 (+)
XLOC_000598 cbr1 coding downstream 60628 47165842 ~ 47173403 (+)
XLOC_000599 morc3b coding downstream 73315 47178529 ~ 47202163 (+)
XLOC_000600 bcl9 coding downstream 226430 47331644 ~ 47411186 (+)
XLOC_000601 gja8b coding downstream 340818 47446032 ~ 47448850 (+)
XLOC_000586 BX465849.1 non-coding upstream 687865 46400612 ~ 46401636 (+)
XLOC_000602 NA non-coding downstream 348379 47453593 ~ 47459506 (+)
XLOC_000608 CR381623.1 non-coding downstream 792055 47897269 ~ 47897385 (+)
XLOC_000609 CR381623.2 non-coding downstream 808881 47914095 ~ 47914209 (+)
XLOC_000610 NA non-coding downstream 1053183 48158397 ~ 48158958 (+)

Expression


Co-expression Network