AMCG00004699


Basic Information

Item Value
gene id AMCG00004699
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56846683 ~ 56853046 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004699
ATGGGGCGGAAGTTGGATCCCACCAATAAGCAGAAGCGAGGGCCAGGGCGGAAGTCCAGGAAGCAGAAGGGGGCGGAGACTGAGATCCCCAAGTTCCTGCTGGAGGagaAACCTGTGCCGAAACGACTGTCCAGCAGGGCGAGGAAACGGGCTGTGAAGAGAACTGTGCAGACCCCCAAGCCCAGCAGCACAGagccagaggaggaggagcagaccACAGGGTTCACAGATGAGAACAGTGACTGGCTGAAGCCGGTCAAGCGGAAGCACCCTGCCGGCGAGAGCCAATCAGAGAGCGAGGAGGAGAGTGATGAGGAGGAACTGAGAGACGACTTTGGAGTCGAGGAGGAGAGTAAGGGAGAGGAGGCggaggaaggagagaCCGTCCTGCCCCTGGACCTGCAGTCAGTGCACCAGCGGATCAAGGACAACGTTGACGTCCTCACGCACTTCTCCTCCAAGCGCGAGCCGGGCCGGGAGCGGGCCGAGTACCTGGCCCTCCTCAGGCAGGACCTGGCCACCTACTACAGCTACAACGCCTACCTGCTGGACAAGATGCTGGAGCTCTTCCCCCTGTCTGAGTACCTGGCTGGCCACTACATGCTGCAGGGTGCCTCCAGTCTGCTGCCCGTCATGGCGCTGGCCCCCCAGCAGGGGGAGACGGTGCTGGACATGAGCGCTGCACCGGGGGGCAAGACCTCCTACATGGCCCAGCTGATGCGCAACACAGGGGCCATCGTGGCAAACGACCTGAGCGCCGAGCGGCTGCGCAGCGTGGTGGGCAACCTGCACCGGCTGGGAGTGACCAACACGGTGGTGAGCTCCTATGATGGGCGCCAGTTCCCCAAGGTGATGGGAGGTTTCGACCGGGTTCTGCTGGATGCCCCGTGTTCCGGAACTGGAGTGGAGGAGAACGAGTGGGTGGTGGACTACGCCCTGAAGAAGAGGAACGTGAAGCTGGTGCCCGCTGGCCTGGACTTCGGGAAAGAGGGCTTCACCAGGTTCAAGGAGCGCCGCTTCCACCCCTCCCTGCGTCTCTGCCGCCGCTTCTACCCACACTCCCACAACATGGATGGCTTCTTCGTGGCCAAACTGAAGAAGTTCTCCAACGCCATCCCTGCCCCTGCGCCAGcgGAGGAGGGCGACCCCTCAGAGAAGAAGACAGAGGCAGGTTCTGCCCCAACAACCTCTCCCATGcaggggtcaaaggtcacgGGCAAGAGGCAGGTGCCACAGGGAGAGATGGGAGGAGAAGGAAGGGTGGCGAAAAGGGGGAAGGAGAAAGTCAGCCAAAAAGAGAAGCAGAAGAAAGAGGTGGCTCTGAAGAAGAAGCAGGAACAGAAGGAAgacaaggaggaggagggagaggagggaggagatggtgtgaaggagaggaaggagggagtGAAGGGAGGGAACAGGTTTGAGAAGAGGAAGAGGGTGAGCTCTGTGAAGAAGAACAGAATGggtaaaaacaaattcaagaaGTTTAAGAAGATGCAGAAGAACCCAGGTGGCCAATGA

Function

GO: NA

KEGG:

id description
K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004699 True 1524 mRNA 0.60 10 56846683 56853046

Neighbor

gene id symbol gene type direction distance location
AMCG00004698 NA coding downstream 9749 56825021 ~ 56836934 (-)
AMCG00004689 NA coding downstream 108434 56735843 ~ 56738249 (-)
AMCG00004693 NA coding downstream 140869 56705344 ~ 56705814 (-)
AMCG00004691 NA coding downstream 144170 56698321 ~ 56702513 (-)
AMCG00004684 NA coding downstream 191598 56653182 ~ 56655085 (-)
AMCG00004697 NA coding upstream 3310 56856356 ~ 56858606 (-)
AMCG00004704 NA coding upstream 44557 56897603 ~ 56910267 (-)
AMCG00004706 NA coding upstream 80351 56933397 ~ 56956495 (-)
AMCG00004708 NA coding upstream 122073 56975119 ~ 56982616 (-)
AMCG00004705 NA coding upstream 184441 57037487 ~ 57050034 (-)
G10084 NA non-coding downstream 25897 56762045 ~ 56820786 (-)
G10116 NA non-coding downstream 92292 56753025 ~ 56754391 (-)
G10108 NA non-coding downstream 132495 56712389 ~ 56714188 (-)
G10093 NA non-coding downstream 198877 56606421 ~ 56647806 (-)
G10073 NA non-coding downstream 330269 56515501 ~ 56516414 (-)
G10135 NA non-coding upstream 7291 56860337 ~ 56861643 (-)
G10123 NA other downstream 54522 56788752 ~ 56792161 (-)
G10121 NA other downstream 68214 56777126 ~ 56778469 (-)
G10079 NA other downstream 71243 56772502 ~ 56775440 (-)
G10115 NA other downstream 95720 56747791 ~ 56750963 (-)
AMCG00004690 NA other downstream 154977 56690719 ~ 56691706 (-)
G10157 NA other upstream 172491 57025537 ~ 57028915 (-)

Expression


Co-expression Network