AMCG00004689


Basic Information

Item Value
gene id AMCG00004689
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56735843 ~ 56738249 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004689
ATGCTGTGGACCCCCGCGGTACCGGCGCCGCTGCTGCCCGGGCCCCGCGCTCTCCTCCTCGGCGCGCTGCTGCTCTGTGTGCCGCTGAGCCCCGCCGGCAGCCGCGCCGCGCCCCCCGCCCCGGCCGCGGAGCAGCTTCTGCAGGACTTTCTGGAGCAGTACAACGACCTCTTGACCTTAGATGACCTGGTCACCCTTGCCAGGGGGGACTCAAAGGTCGCCCCAAACTGGGCGCAGCCTCCCCCGGCCAATGAGAATGCTTGGTACCGCCTTCTGAAGGACCTGCTGGCCAATCGCAAGAGAGTATTGCCCGACCGGGAGAAGAAGGCGTGGTCGCGGGGCTGCTTTGGCCTGAAGCTCGACCGGATTGGCTCACTCAGTGGGCTGGGCTGCTAGCCATTGGCTGAGGTGCTCTGCTCACCCTCTCACCCTCCGTTGAGTTCTAGAACACCCTAGAATATGTTCCAGGAACAGCCCGATGCTTCTAGAACAGTGCTTCTAGAACCCAGCAGCTGCCTCGGGCACAGTGTGGGACCCCTCCAGcctcctctcctgtctgtcTTCCCCTCTTTTCCTCTTTGTGTTATTGTACCTCCTgatttttccttctctccctacttctgtctttctttctcccttttcaCTGCaccttcactctctctttcctgCCATATGTCCATCTTCCAATTCTTCCTCTGTCTATCTCTCCTTCTTTCTATCTTTTggctatttttatgttttgcttatttttctctcactttttctctcttctgctTTGTTCTGCTTCCACTTTCACCTGCCTTCtcacttctccctctctctctccctcttttcttctctctgtgaAGCTGATGAACAgactgtgttgttgtgtaggGTTCTGTAGtgttgtgtgctgctgtgtctgAATTGTGTTGCTGTAACTGTGGAATTGTGAGTTGTACTGGTTATATACAGATTGATGTggctttattttgtatctggCTGCTTTTGTGTCAGAGATGCAGGATTGTGTAGATATTATTGCCTCTAGCCTGGGCCCTATAGTACAATATACTATAGCCATATACTATAGTCCAATATAGGCCTTATATCGctatactatacaatactgtagtatactatactatagtccaatATAGACCCTATAGCCATgtcctatactatactatactattgtCAAATACCATCTCTATACTACAGTCTATACTCTACTCTATACTATTGAACTATAGTGTAGTTCAATATAGAGCCTAAAACTATACTATACAGTACACCAGACACCAATaatataatgatgatgatgatgatgataataataatatctcacTCAGTAGAGCTGTATGAAAGAGTACAGCACCTACTgacagagggagggatggagggagagagtttCTTACTGTAGAAAGTATACTGTTTTTACTGCATTTCTATGCTGATTGTAACTGATTGTATTGTGCTGATTTAACACAGTGACTTGTGTCAGATTGTAATAAAGTGCCGCATAATTGTCTAGATGGATGAGACTGAGCC

Function

GO:      GO:0044699

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004689 True 1533 mRNA 0.48 3 56735843 56738249

Neighbor

gene id symbol gene type direction distance location
AMCG00004693 NA coding downstream 30029 56705344 ~ 56705814 (-)
AMCG00004691 NA coding downstream 33330 56698321 ~ 56702513 (-)
AMCG00004684 NA coding downstream 80758 56653182 ~ 56655085 (-)
AMCG00004682 cdc42l,LOC108433756,LOC108272678,LOC107552852,LOC105025850,LOC103039613 coding downstream 224150 56494656 ~ 56511693 (-)
AMCG00004676 NA coding downstream 292887 56424588 ~ 56442956 (-)
AMCG00004698 NA coding upstream 86772 56825021 ~ 56836934 (-)
AMCG00004699 NA coding upstream 108434 56846683 ~ 56853046 (-)
AMCG00004697 NA coding upstream 118107 56856356 ~ 56858606 (-)
AMCG00004704 NA coding upstream 159354 56897603 ~ 56910267 (-)
AMCG00004706 NA coding upstream 195148 56933397 ~ 56956495 (-)
G10108 NA non-coding downstream 21655 56712389 ~ 56714188 (-)
G10093 NA non-coding downstream 88037 56606421 ~ 56647806 (-)
G10073 NA non-coding downstream 219429 56515501 ~ 56516414 (-)
G10068 NA non-coding downstream 244080 56489568 ~ 56491763 (-)
G10067 NA non-coding downstream 264417 56470522 ~ 56471426 (-)
G10116 NA non-coding upstream 14776 56753025 ~ 56754391 (-)
G10084 NA non-coding upstream 23796 56762045 ~ 56820786 (-)
G10135 NA non-coding upstream 122088 56860337 ~ 56861643 (-)
AMCG00004690 NA other downstream 44137 56690719 ~ 56691706 (-)
AMCG00004692 LOC103030083,LOC107394826,LOC101069563,LOC101467164,LOC101164413,LOC106519597,LOC108443584 other downstream 45351 56685737 ~ 56690492 (-)
AMCG00004675 chd4,LOC107724784,LOC107671917,LOC107714608,LOC107704911 other downstream 250995 56450789 ~ 56484848 (-)
AMCG00004672 NA other downstream 350973 56283994 ~ 56384870 (-)
AMCG00004665 p3h3,LOC106605089,LOC106583419 other downstream 626758 56106713 ~ 56109085 (-)
G10115 NA other upstream 9542 56747791 ~ 56750963 (-)
G10079 NA other upstream 34253 56772502 ~ 56775440 (-)
G10121 NA other upstream 38877 56777126 ~ 56778469 (-)
G10123 NA other upstream 50503 56788752 ~ 56792161 (-)
G10157 NA other upstream 287288 57025537 ~ 57028915 (-)

Expression


Co-expression Network