G10068


Basic Information

Item Value
gene id G10068
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56489568 ~ 56491763 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU12530
tggacactacacaacattaacactgactgactggacactacagtacattaacactgactgactggacactacagtacattaacactgactgactgactggacactacagtacattaacactgactggacactacagcacattaacactgactgactgactggacactacagtacattaacactgactgactggacactacagcacattaacactgactgactgactggacactacagcacattaacactgactgactggacacttcagcacattaacactgatttACTGACTGATAACACTGATCGGAGGGTGTGCATGTTAGTGAGAGATGGTGAGCGAAAACAGAACACTATTTTATGACATTACAGAGAGTGAACACTAGGTGGCTGCAAATCCTACATTAATACAGTACTACGTTTGGCTCCTATAGAGGATCTGAGATAActactaacacacacaaacacactaacatacacacacagacacacatacacacagacacactaacatgcacacagacacactaacatacac

Function

NR:

description
PREDICTED: probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12530 True 535 lncRNA 0.39 2 56489568 56491763

Neighbor

gene id symbol gene type direction distance location
AMCG00004676 NA coding downstream 46612 56424588 ~ 56442956 (-)
AMCG00004678 NA coding downstream 66662 56417056 ~ 56422906 (-)
AMCG00004677 NA coding downstream 75144 56410985 ~ 56414424 (-)
AMCG00004674 NA coding downstream 80277 56401461 ~ 56409291 (-)
AMCG00004671 NA coding downstream 276704 56185217 ~ 56212864 (-)
AMCG00004682 cdc42l,LOC108433756,LOC108272678,LOC107552852,LOC105025850,LOC103039613 coding upstream 2893 56494656 ~ 56511693 (-)
AMCG00004684 NA coding upstream 161419 56653182 ~ 56655085 (-)
AMCG00004691 NA coding upstream 206558 56698321 ~ 56702513 (-)
AMCG00004693 NA coding upstream 213581 56705344 ~ 56705814 (-)
AMCG00004689 NA coding upstream 244080 56735843 ~ 56738249 (-)
G10067 NA non-coding downstream 18142 56470522 ~ 56471426 (-)
G10061 NA non-coding downstream 135162 56353928 ~ 56354406 (-)
G10034 NA non-coding downstream 359010 56129442 ~ 56130558 (-)
G10007 NA non-coding downstream 420706 56066549 ~ 56068862 (-)
G9794 NA non-coding downstream 453619 56033498 ~ 56035949 (-)
G10073 NA non-coding upstream 23738 56515501 ~ 56516414 (-)
G10082 NA non-coding upstream 36853 56528616 ~ 57019807 (-)
G10093 NA non-coding upstream 114658 56606421 ~ 56647806 (-)
G10083 NA non-coding upstream 191374 56683137 ~ 56894619 (-)
G10108 NA non-coding upstream 220626 56712389 ~ 56714188 (-)
AMCG00004675 chd4,LOC107724784,LOC107671917,LOC107714608,LOC107704911 other downstream 4720 56450789 ~ 56484848 (-)
AMCG00004672 NA other downstream 104698 56283994 ~ 56384870 (-)
AMCG00004665 p3h3,LOC106605089,LOC106583419 other downstream 380483 56106713 ~ 56109085 (-)
AMCG00004660 LOC106605085 other downstream 480702 56006051 ~ 56008866 (-)
AMCG00004652 NA other downstream 595482 55889982 ~ 55894086 (-)
AMCG00004685 NA other upstream 121264 56613027 ~ 56752935 (-)
AMCG00004692 LOC103030083,LOC107394826,LOC101069563,LOC101467164,LOC101164413,LOC106519597,LOC108443584 other upstream 193974 56685737 ~ 56690492 (-)
AMCG00004690 NA other upstream 198956 56690719 ~ 56691706 (-)
G10115 NA other upstream 256028 56747791 ~ 56750963 (-)
G10079 NA other upstream 280739 56772502 ~ 56775440 (-)

Expression


Co-expression Network