AMCG00004678


Basic Information

Item Value
gene id AMCG00004678
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56417056 ~ 56422906 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004678
aTGCCGCCCAATCTGACGGGGTTGTATCAGATGGTGTCTCAGGACAACATGGACGAATACCTCGCCGCGCTGGACAGTGATGCTCAGTGCCGCTGCACCTCTGGGTTTTACTGCTCTGACCCTGCCTGTGAGCACTGCCTCCcattgtctgtctgcctgcctggaGAAGGAGCCACAAagcaggTTCAGCCTCCCAGCTCTCCGACCGAGACCTGCGATCCCTCGGTGACCTTCTACCCCTTGGAGACCTGTGACCTGGAGGCTGACGGTGCGACCCTGCTGACCCTGCGCACCTGCGAGCGCTTAGGCCTGCCAACAAATTACCCCACTGGCTCTGCCCTCCACTCCGAGCCCCAGGAGGATGAATGGACTGACCCGTGCTGA

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004678 True 384 mRNA 0.61 3 56417056 56422906

Neighbor

gene id symbol gene type direction distance location
AMCG00004677 NA coding downstream 2632 56410985 ~ 56414424 (-)
AMCG00004674 NA coding downstream 7765 56401461 ~ 56409291 (-)
AMCG00004671 NA coding downstream 204192 56185217 ~ 56212864 (-)
AMCG00004662 NA coding downstream 254725 56147487 ~ 56162331 (-)
AMCG00004664 NA coding downstream 301132 56113405 ~ 56115924 (-)
AMCG00004676 NA coding upstream 1682 56424588 ~ 56442956 (-)
AMCG00004682 cdc42l,LOC108433756,LOC108272678,LOC107552852,LOC105025850,LOC103039613 coding upstream 71750 56494656 ~ 56511693 (-)
AMCG00004684 NA coding upstream 230276 56653182 ~ 56655085 (-)
AMCG00004691 NA coding upstream 275415 56698321 ~ 56702513 (-)
AMCG00004693 NA coding upstream 282438 56705344 ~ 56705814 (-)
G10061 NA non-coding downstream 62650 56353928 ~ 56354406 (-)
G10034 NA non-coding downstream 286498 56129442 ~ 56130558 (-)
G10007 NA non-coding downstream 348194 56066549 ~ 56068862 (-)
G9794 NA non-coding downstream 381107 56033498 ~ 56035949 (-)
G9751 NA non-coding downstream 518994 55897856 ~ 55898062 (-)
G10067 NA non-coding upstream 47616 56470522 ~ 56471426 (-)
G10068 NA non-coding upstream 66662 56489568 ~ 56491763 (-)
G10073 NA non-coding upstream 92595 56515501 ~ 56516414 (-)
G10082 NA non-coding upstream 105710 56528616 ~ 57019807 (-)
G10093 NA non-coding upstream 183515 56606421 ~ 56647806 (-)
AMCG00004672 NA other downstream 32186 56283994 ~ 56384870 (-)
AMCG00004665 p3h3,LOC106605089,LOC106583419 other downstream 307971 56106713 ~ 56109085 (-)
AMCG00004660 LOC106605085 other downstream 408190 56006051 ~ 56008866 (-)
AMCG00004652 NA other downstream 522970 55889982 ~ 55894086 (-)
AMCG00004653 znf384l,LOC108433737,LOC107665159,LOC106605395 other downstream 570885 55814402 ~ 55846171 (-)
AMCG00004675 chd4,LOC107724784,LOC107671917,LOC107714608,LOC107704911 other upstream 27883 56450789 ~ 56484848 (-)
AMCG00004685 NA other upstream 190121 56613027 ~ 56752935 (-)
AMCG00004692 LOC103030083,LOC107394826,LOC101069563,LOC101467164,LOC101164413,LOC106519597,LOC108443584 other upstream 262831 56685737 ~ 56690492 (-)
AMCG00004690 NA other upstream 267813 56690719 ~ 56691706 (-)
G10115 NA other upstream 324885 56747791 ~ 56750963 (-)

Expression


Co-expression Network