G9794


Basic Information

Item Value
gene id G9794
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56033498 ~ 56035949 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU12143
TTGTTTTACaatcaagttattttattaatataaaaactcaaaaaagttctcaatttcaattttgtCAACTTTTGGTAACAATAAGGCAAAACAGGTGAGGacaataatcaatattaattattatccctctattaaaatgaatattatttgtattattgtatatatttatcatcACAGTGAGTTACAGTTCCCCTGCTGTGCCTGTACAgagtgaggggggggggctgtCTCAATggaatcaaatgtattattaattattatttattattattattattattattattattattataattaagtaCAATGCGGAGGTCAGAGGTGACTTGCAGCAGTTTTGGTCAGGAGTTTTTTGCATGTCGTCGTTTGCCGTCCTGACGCCGCCCCTTCTAAGCCACTTCCTTTGTGAGAATTTCCTATCTTATTTACAAATGTCATCACAcccctaaaaaacaaaacacccccccaaaacaaaaaccacaaaatatatatattggcaaAAATGGTCTTCAGAAAAACAGGAAGAGTGAGAAAGGAGGGAATGAAGGAGAAGGAGTGATACAGGAGATGAGAGAGGTGAAGAAAAGGTCAGAAATTGAGAGAGTGAGGAGATGAGGGGTGAAGGGAGAGTGAAagggaaaagaggaaaaaaaaaaaaaaaaaaaaaaaaagatacatacatCCCTTATGTAGACCTGCTGTTTCGGTCGGTATAagacaaacaaccaaaaaaaaaaacgtaagactccaaacaaactaaaaaagacaattaaaacaattagaaaacCAACAGATCCCATTAGTATGCTGCCCAATTAGTCATTATCAAGTCATTACAAAAACGTCACTGTGAACATTCAGTAGAAACAGAAGGCAATtgtggagagagtgtgtgtgtgtgtgtgtgtgtatgcatgtgcgtgtgtataGTGTGCTATAAAAAAAGTGTGCATtacagatgtatatatacagtacagttccGTCTCTGCATTACAGCTGTATATAAATAGTACAAAACAGTATCTGTATTACAGGAGAATATTTATAGTaaagtacagtgtaatacaggtgtatatatacagtacagtctcTGTAATACAcacacaacctctgTATTTATACACTGTATCAACAAGCAGACTGGGTCCAACCTGCACTCCAtccttctctctgtctgctGCACTGTATTGTAGCAGAACAGCTGTGTGGAGGTGAAGGGGTCCTGGCAAGGCTTGTATAGCAGTATTGTGCAGCACACAACAGTAAGGTAGAGCAGAGCATAGCGTTGTATAACAGTGTAGCACACCACAACGGAGTATAGGacaatacagtatagtacaATAGTGCAGTACCGTGTAGATGAATATTGCAGTGCTGTATTATAGTGaagtagtacagtacagactaTAAAGTACTGTGCTGGACTATATTGTTCTGAACTGGATTGTATGGCACtacatactgtattatattttattggatTGCAGTAAACCATGTTAGATTGTATTTCAGTATACTATACAATATTAAACTAAAGAAAccagcactgtgctgtactgcactacaacataccacactgcactgtattacattttacaacactGCCCCCTGCTACATTATATCACACTTTAATATAGTAATACACTAGATTGTACCGTATCAGATTGTTCTGTAATATAACCATCTACTTCTTTTCACTATACTACACTAGAATTCAGTGTATTGTAGTATAAAACACTACACTAGATTGTACTTTACAGTGATGTAGTTTACTATTTCCTTTTAGTATCATAAAGTACACTATTGCATTATACAATATACTACATGACACTAATGTACTGCATTGCATCATTGTACACTACATTGCACTGTACTGCAGATTATATTACACTATGATAAACTACATCGCTTTGTCCTACACTCTCATGGTATTACACTATAGTACTGTACATAACTATTACACTGCTATGTGAAAGATATTGTGCACAGATGGCTTTAGTGGCATTGGTTGCAGTCCCTGAACTGATGGTAACACagtgtataaatgttaaaaatgtattcatttaaaaaacccTAATTACAGTGAGATAACAAGGGAGTGGCACTGCGGTTTAGAGTcgttttgtcattttttgtttcaattatttgtttccttcctcaaacaaaaaatatacagatttatatatatatttatattaaaacataaaaaatatattctggtCGCAGTAACGGCAGCTTCAgtggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12143 True 2245 lncRNA 0.53 2 56033498 56035949

Neighbor

gene id symbol gene type direction distance location
AMCG00004654 NA coding downstream 162538 55868647 ~ 55870960 (-)
AMCG00004648 NA coding downstream 348512 55682452 ~ 55684986 (-)
AMCG00004641 NA coding downstream 404515 55614612 ~ 55628983 (-)
AMCG00004637 NA coding downstream 570772 55460253 ~ 55462726 (-)
AMCG00004629 NA coding downstream 697265 55314396 ~ 55336233 (-)
AMCG00004663 NA coding upstream 57160 56093109 ~ 56096391 (-)
AMCG00004664 NA coding upstream 77456 56113405 ~ 56115924 (-)
AMCG00004662 NA coding upstream 111538 56147487 ~ 56162331 (-)
AMCG00004671 NA coding upstream 149268 56185217 ~ 56212864 (-)
AMCG00004674 NA coding upstream 365512 56401461 ~ 56409291 (-)
G9751 NA non-coding downstream 135436 55897856 ~ 55898062 (-)
G9719 NA non-coding downstream 252891 55779425 ~ 55780607 (-)
G9701 NA non-coding downstream 311485 55721706 ~ 55722013 (-)
G9700 NA non-coding downstream 313281 55719964 ~ 55720217 (-)
G9698 NA non-coding downstream 314769 55718137 ~ 55718729 (-)
G10007 NA non-coding upstream 30600 56066549 ~ 56068862 (-)
G10034 NA non-coding upstream 93493 56129442 ~ 56130558 (-)
G10061 NA non-coding upstream 317979 56353928 ~ 56354406 (-)
G10067 NA non-coding upstream 434573 56470522 ~ 56471426 (-)
G10068 NA non-coding upstream 453619 56489568 ~ 56491763 (-)
AMCG00004660 LOC106605085 other downstream 24632 56006051 ~ 56008866 (-)
AMCG00004652 NA other downstream 139412 55889982 ~ 55894086 (-)
AMCG00004653 znf384l,LOC108433737,LOC107665159,LOC106605395 other downstream 187327 55814402 ~ 55846171 (-)
AMCG00004649 NA other downstream 290201 55737565 ~ 55743297 (-)
AMCG00004640 NA other downstream 482273 55529650 ~ 55551225 (-)
AMCG00004665 p3h3,LOC106605089,LOC106583419 other upstream 70764 56106713 ~ 56109085 (-)
AMCG00004672 NA other upstream 248045 56283994 ~ 56384870 (-)
AMCG00004675 chd4,LOC107724784,LOC107671917,LOC107714608,LOC107704911 other upstream 414840 56450789 ~ 56484848 (-)
AMCG00004685 NA other upstream 577078 56613027 ~ 56752935 (-)
AMCG00004692 LOC103030083,LOC107394826,LOC101069563,LOC101467164,LOC101164413,LOC106519597,LOC108443584 other upstream 649788 56685737 ~ 56690492 (-)

Expression


Co-expression Network