AMCG00004641


Basic Information

Item Value
gene id AMCG00004641
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 55614612 ~ 55628983 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004641
ATGCCCGCAGGTGTGACGCGCTGGAGCCGCGCTGCGGACGTGACGGGCGTGACGGAAATAACCATGGAAACAACACCTGCAGACAGGTATAAGCGTGTCACCCAAAACCACACAAGCCTGTCCTCATCATTTCAGATGGAGTTCTGTAACCCAGCCTTTGAGCCGGAGAGTGAGGGAGAAGAGCAAGCCAGGAACAGCTTTAGTGTGGAGCCGCTTCCGGGCCCAGCAGGAAGTTGGCTGCGGCTGTGCGCTGTGCGTCTGGGGACCCCCTGGTGTGGACTAGCGGTGCTGGTTGTCTCAGTGTCGGTGTTTTTCCTTGTCAGTGCCCTTGGACTCACATTGCTGCTGGTTTTCACCCAGCTGAAGGAGCAACCCTCCCAGGAAGTGACTGTGGAGCCCCCTTTGAATTCTGGGAACAGAGACTCGCTCCCCAGCTTCCCGTTGAGCCCTGCTGACACAGACACGCACGGCAGCACTGCCCCCCACCAGCCGTCAGGAGACTCCACTGCTGCCCCTGGCGGTTCAGGCCCGGTTACAGAATGTCAATATCTTCTGTACAGTAGACTGCAAAAGACCAGTCAAGGTATGTCAGCAACGCCACGTGGTTTGCTTCTAGCTGACGTGTTCCCTTGCTCGTTGGCAGCCTGTGGGGGGGTCCTGAGGGAGCATGAGGGCACCTTCAGCTCGCCAAACCACCCTGCCAGCTACCCCCCTGACTCCCTCTGCGTGTGGACCATTGAGGTCAGCCCCCCCTTCCTTATCCAGCTGCACGTTTCATCGCTGGCGGTGGAGGGGCCAACCCCCTGCCTCTTCGACTGGTTGGAGCTACGGGAGGAGGCCATCAATGCCAGTAGCCTCTCCATCACCAGGTTTTGTGGGAACAAGGCACCCCCTACAGTGAACACCAACACCAGCACCTTGCAGGTCACCTTCAGATCAGACAGCAGTATTGGTGGAACAGGATTCACGGCCCGGTACCAGGCCATTTCCCCCAGCCAGAAAAGCTGCTCCTGGGACGAGTTTTTTTGTGATGGCGGTCGTTGTGTGCTACCGGGTGGTATGTGTGACAGTCACCCCGACTGCCTGGACTACAGTGATGAATCAAACTGCAGCCGCAAGCATAAAGAGTGTGGCGGACAGAAGACTGGCAGCAATGGAGACTTGTCAAGTCCAAACCACCCTAAACCTTATCCTCACCAGCAGctgtgtgtgtggcagATTTCTGTCACCGAGGGCCATGTCGTCAGGCTCACCTTCCGCAACTTCAGCCTGGAGACTCAGGATGTGTGCGAGTTTGACTTTGTGGAGGTGCACGACGGCACGGGCACCAAAGACAACAGTGTGCTGGGCAGATTCTGTGGGTCCAGTCTGCCTCCAGAGCTGACCTCCTCTGGCCCAGTGATGACCGTGCTGTTTGTGGCTGATGAGGGGGTGGCGGACAGTGGGTTCTTTGCCACCTACCAGGCTGTTACCGCCACAGACAAAACCTGTGGTCCTGAGCAGTTTTCCTGCGTCAATGGAGAATGCAAGGAGATGGAGTGGTTGTGCGACGGCTGGACCGATTGCTTGGATGGCAGTGACGAACTGGGCTGTGACAACTCCACATACCCCCCCTTCATGGCCCCCTGTGAACCAATTGAGGTGGAGATGTGCCAGGGTTTGAGCTACAACCTGACCTCTTTCCCAAACATCTGGCTCTCCATCTCAGACCAGAGGGAGGCGGCCAGCACGCTGAGACACTACAAGGTGTTGATGGAGCTGGCGTGTTTCGAAGCGCTGCGGCGGCTGGTCTGTGGGCTGTTCGTGCCGCAATGCagcagggaggggggggtgctACAGCCATGCCGCTCTGTGTGCGTCTCGGCCGAGCTGCAGTGCCGCCCATCCCTGGAGCTCCTCACTATGGGCTGGCCCTTCAACTGCCACCTCTTTCCCGATTCCCAGGACCCCATTGAGTGTGTCCTCCCCTAG

Function

GO: NA

KEGG:

id description
K24359 MFRP; membrane frizzled-related protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004641 True 1971 mRNA 0.58 13 55614612 55628983

Neighbor

gene id symbol gene type direction distance location
AMCG00004637 NA coding downstream 151886 55460253 ~ 55462726 (-)
AMCG00004629 NA coding downstream 278379 55314396 ~ 55336233 (-)
AMCG00004631 NA coding downstream 300841 55311400 ~ 55313771 (-)
AMCG00004630 NA coding downstream 321588 55272343 ~ 55293024 (-)
AMCG00004633 NA coding downstream 344451 55224835 ~ 55270161 (-)
AMCG00004648 NA coding upstream 53469 55682452 ~ 55684986 (-)
AMCG00004654 NA coding upstream 239664 55868647 ~ 55870960 (-)
AMCG00004663 NA coding upstream 464126 56093109 ~ 56096391 (-)
AMCG00004664 NA coding upstream 484422 56113405 ~ 56115924 (-)
AMCG00004662 NA coding upstream 518504 56147487 ~ 56162331 (-)
G9661 NA non-coding downstream 7196 55606927 ~ 55607416 (-)
G9650 NA non-coding downstream 9037 55585048 ~ 55605575 (-)
G9656 NA non-coding downstream 29617 55578276 ~ 55584995 (-)
G9643 NA non-coding downstream 55304 55553824 ~ 55559308 (-)
G9593 NA non-coding downstream 256979 55346783 ~ 55357633 (-)
G9698 NA non-coding upstream 89154 55718137 ~ 55718729 (-)
G9700 NA non-coding upstream 90981 55719964 ~ 55720217 (-)
G9701 NA non-coding upstream 92723 55721706 ~ 55722013 (-)
G9719 NA non-coding upstream 150442 55779425 ~ 55780607 (-)
G9751 NA non-coding upstream 268873 55897856 ~ 55898062 (-)
AMCG00004640 NA other downstream 63387 55529650 ~ 55551225 (-)
G9604 NA other downstream 194554 55367585 ~ 55420058 (-)
G9608 NA other downstream 225673 55382216 ~ 55388939 (-)
AMCG00004618 dscaml1,LOC107592669,LOC107699174,LOC107728164,LOC107699210,LOC107566081 other downstream 694674 54915584 ~ 54919938 (-)
G9414 NA other downstream 994557 54576640 ~ 54620055 (-)
AMCG00004649 NA other upstream 108582 55737565 ~ 55743297 (-)
AMCG00004653 znf384l,LOC108433737,LOC107665159,LOC106605395 other upstream 185419 55814402 ~ 55846171 (-)
AMCG00004652 NA other upstream 260999 55889982 ~ 55894086 (-)
AMCG00004660 LOC106605085 other upstream 377068 56006051 ~ 56008866 (-)
AMCG00004665 p3h3,LOC106605089,LOC106583419 other upstream 477730 56106713 ~ 56109085 (-)

Expression


Co-expression Network