G10034



Basic Information


Item Value
gene id G10034
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56129442 ~ 56130558 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU12488
caaatattaaaatatttactaaatttttgaaaaatgtaagtcAATTAAACATGTAGATgacagtcagacacacagtgaaacacacatacaaagagGCAGGAATGGATAGACAGGCAATAAATAAAGCTCAGAGTCCAGTTGGAGTTTAAACAGACAGTCTCTTTTAATGGCATCAGTAAAACAATCTCCCCAACTGTCCCCACCCTCGCAAAccgtgatttatttattaatcatcatgtaggaattataattattgttattacccAGGTAtatttctttgtctttcttgtTGCAGAGtttatttggaaacatttgtctgtttttcaatgCAAGGGTTAGAGGAAGGAGGCGTGGCTAGCGGCAGCCGGTGGGATCTGGTTGGCCGAGGCAGGCGGTGATGTCAGAGAAGCGGCAGCGAATCAGGCAGAGGGATTTGGTTTGGTTTAGGGAGAAGGGAAAATGGGGAAAAGGATATAGTGGATAGTCTgagagaatgtgtgtgcatttgtgtgtgtgagagagagagagagagatagatagagagatcaAACTTAAATCTTATAGTGTATTGAAAACCTAAACAGACTGGTTAATTCAATTGTATTCTCTTTCAGAATTTTCAGTCTATATTAACCCCCCCACTCTTCATCTGTGAATCAAAGCTGTGGTGTAACAAGAGTATTAACCCCCTCTCTGATCTGTCTATATTAAACCCTCTTTCTCTTGTTATCCAGGTCTCAGCAACTGTTTCTACAGTGTAGTAACCAATTAACCCCCCTCCTGCTCCCTTCTCACCGAGACGTGCGAGTTTGTTGTGCATTTCAACGACAACCACCTCTACCTCTCTCCCTGTCCAAGAAGTGTATGAacccctctcctcccccccgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgtacAGTGTATGaacccctctcctcctcctcctcctccccctctgccctttcctctcctctcttacTCGGCTACTCTCCTGTAGAAGTACAGGTATCCGAGGTCTTTGGGGGGTTTCTCAGAGGCACACACCTTCTGGTCATTGAAAATCAcccatctgagagagagagacaca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU12488 True 1095 lncRNA 0.43 2 56129442 56130558

Neighbor


gene id symbol gene type direction distance location
AMCG00004664 NA coding downstream 13518 56113405 ~ 56115924 (-)
AMCG00004663 NA coding downstream 33051 56093109 ~ 56096391 (-)
AMCG00004654 NA coding downstream 258482 55868647 ~ 55870960 (-)
AMCG00004648 NA coding downstream 444456 55682452 ~ 55684986 (-)
AMCG00004641 NA coding downstream 500459 55614612 ~ 55628983 (-)
AMCG00004662 NA coding upstream 16929 56147487 ~ 56162331 (-)
AMCG00004671 NA coding upstream 54659 56185217 ~ 56212864 (-)
AMCG00004674 NA coding upstream 270903 56401461 ~ 56409291 (-)
AMCG00004677 NA coding upstream 280427 56410985 ~ 56414424 (-)
AMCG00004678 NA coding upstream 286498 56417056 ~ 56422906 (-)
G10007 NA non-coding downstream 60580 56066549 ~ 56068862 (-)
G9794 NA non-coding downstream 93493 56033498 ~ 56035949 (-)
G9751 NA non-coding downstream 231380 55897856 ~ 55898062 (-)
G9719 NA non-coding downstream 348835 55779425 ~ 55780607 (-)
G9701 NA non-coding downstream 407429 55721706 ~ 55722013 (-)
G10061 NA non-coding upstream 223370 56353928 ~ 56354406 (-)
G10067 NA non-coding upstream 339964 56470522 ~ 56471426 (-)
G10068 NA non-coding upstream 359010 56489568 ~ 56491763 (-)
G10073 NA non-coding upstream 384943 56515501 ~ 56516414 (-)
G10082 NA non-coding upstream 398058 56528616 ~ 57019807 (-)
AMCG00004665 p3h3,LOC106605089,LOC106583419 other downstream 20357 56106713 ~ 56109085 (-)
AMCG00004660 LOC106605085 other downstream 120576 56006051 ~ 56008866 (-)
AMCG00004652 NA other downstream 235356 55889982 ~ 55894086 (-)
AMCG00004653 znf384l,LOC108433737,LOC107665159,LOC106605395 other downstream 283271 55814402 ~ 55846171 (-)
AMCG00004649 NA other downstream 386145 55737565 ~ 55743297 (-)
AMCG00004672 NA other upstream 153436 56283994 ~ 56384870 (-)
AMCG00004675 chd4,LOC107724784,LOC107671917,LOC107714608,LOC107704911 other upstream 320231 56450789 ~ 56484848 (-)
AMCG00004685 NA other upstream 482469 56613027 ~ 56752935 (-)
AMCG00004692 LOC103030083,LOC107394826,LOC101069563,LOC101467164,LOC101164413,LOC106519597,LOC108443584 other upstream 555179 56685737 ~ 56690492 (-)
AMCG00004690 NA other upstream 560161 56690719 ~ 56691706 (-)

Expression



Co-expression Network