Gene
RNA
| Item | Value |
|---|---|
| gene id | G10007 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 56066549 ~ 56068862 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: huntingtin isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU12446 | True | 460 | lncRNA | 0.57 | 2 | 56066549 | 56068862 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004654 | NA | coding | downstream | 195589 | 55868647 ~ 55870960 (-) |
| AMCG00004648 | NA | coding | downstream | 381563 | 55682452 ~ 55684986 (-) |
| AMCG00004641 | NA | coding | downstream | 437566 | 55614612 ~ 55628983 (-) |
| AMCG00004637 | NA | coding | downstream | 603823 | 55460253 ~ 55462726 (-) |
| AMCG00004629 | NA | coding | downstream | 730316 | 55314396 ~ 55336233 (-) |
| AMCG00004663 | NA | coding | upstream | 24247 | 56093109 ~ 56096391 (-) |
| AMCG00004664 | NA | coding | upstream | 44543 | 56113405 ~ 56115924 (-) |
| AMCG00004662 | NA | coding | upstream | 78625 | 56147487 ~ 56162331 (-) |
| AMCG00004671 | NA | coding | upstream | 116355 | 56185217 ~ 56212864 (-) |
| AMCG00004674 | NA | coding | upstream | 332599 | 56401461 ~ 56409291 (-) |
| G9794 | NA | non-coding | downstream | 30600 | 56033498 ~ 56035949 (-) |
| G9751 | NA | non-coding | downstream | 168487 | 55897856 ~ 55898062 (-) |
| G9719 | NA | non-coding | downstream | 285942 | 55779425 ~ 55780607 (-) |
| G9701 | NA | non-coding | downstream | 344536 | 55721706 ~ 55722013 (-) |
| G9700 | NA | non-coding | downstream | 346332 | 55719964 ~ 55720217 (-) |
| G10034 | NA | non-coding | upstream | 60580 | 56129442 ~ 56130558 (-) |
| G10061 | NA | non-coding | upstream | 285066 | 56353928 ~ 56354406 (-) |
| G10067 | NA | non-coding | upstream | 401660 | 56470522 ~ 56471426 (-) |
| G10068 | NA | non-coding | upstream | 420706 | 56489568 ~ 56491763 (-) |
| G10073 | NA | non-coding | upstream | 446639 | 56515501 ~ 56516414 (-) |
| AMCG00004660 | LOC106605085 | other | downstream | 57683 | 56006051 ~ 56008866 (-) |
| AMCG00004652 | NA | other | downstream | 172463 | 55889982 ~ 55894086 (-) |
| AMCG00004653 | znf384l,LOC108433737,LOC107665159,LOC106605395 | other | downstream | 220378 | 55814402 ~ 55846171 (-) |
| AMCG00004649 | NA | other | downstream | 323252 | 55737565 ~ 55743297 (-) |
| AMCG00004640 | NA | other | downstream | 515324 | 55529650 ~ 55551225 (-) |
| AMCG00004665 | p3h3,LOC106605089,LOC106583419 | other | upstream | 37851 | 56106713 ~ 56109085 (-) |
| AMCG00004672 | NA | other | upstream | 215132 | 56283994 ~ 56384870 (-) |
| AMCG00004675 | chd4,LOC107724784,LOC107671917,LOC107714608,LOC107704911 | other | upstream | 381927 | 56450789 ~ 56484848 (-) |
| AMCG00004685 | NA | other | upstream | 544165 | 56613027 ~ 56752935 (-) |
| AMCG00004692 | LOC103030083,LOC107394826,LOC101069563,LOC101467164,LOC101164413,LOC106519597,LOC108443584 | other | upstream | 616875 | 56685737 ~ 56690492 (-) |
