AMCG00004691


Basic Information

Item Value
gene id AMCG00004691
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56698321 ~ 56702513 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004691
gcTCGGTGGCTGATGTCGTACTCTCCTGCTCTCTGGTGGAGGAGGGCGGAGGGATGGGGGGGCTAGGGGGGGGCGCCCTTTTCACCCGAGACGAAGCCACCCTTGTCCTCCGTGACCTCCCGATCCCGGAAGCTGATTCGCTACTGCACGCCGACTGCAACGAACAGGAAGTGACCTGCGAGATCAGCCGTTACTTCCCCCGGGGAGAGGATGGGGCGGGGCCAGTCCCGGGGGAGGCCTTCTTCATTGGCTCAGTGCAGCTGGAAGGGGGCGGGGTTAGCCTCACTCTGGTGCTGAGGGCTCAGCCTGTGGGGGAGGAGCCTGAAGCCGCGCCCCTCACGCAGACGAAACTGCAGCTGCCCCTCAGCCAATCAGGGACGATTCTCACTGAGGtgGTGTTTGTGGTCTTCACCGTCTCTCCCTCAGTCTCCGCCCACCCAGGAGACTCCGCCCTCCTGCCCTGTGGTTTCCGTCAGGCCACGCCCATACAGGAAGTGACTCTTGAGTGGCGGCTGCAGCACAAAGGAAGTGGGCGGAGAGTGCTGGGGCTGAGAGCTGAGCAGGAGTTTGAGGAGCCAGTGGGTGAGGAGGATTTTAGTGTGTGtgggCTGCAGGATGAAGGGATGGTGTCACTGCACCTGACGGAGgtggagTGGCTGTCTCTCCCCCCTGCCTCTTCCAAACCCCTCCCCATCTCTCAGGGCATCTACTTCTCCAGCCACCGGCAACACAGTGACAGCACCTACTCCCTGTCTGCTCACCTGTCCCTGGATCCCTCCGCCCTGCCCTCTCCTGCCGGAACTACAAGAGTCCAGAGCCTGGCTGATAGTTGGCGTTGTGTTGGCGTCCCTCCTGTTCCTGCTGGCACTGTACTGGACTTTCAGATAGACCAGGGACAAGGATTTGACTTGAGTGAAAGAAGAGAGACAGGAGGAGAAAGACACACACCCAcggacactgacacacagagacacacacacagttattgTCTGCTTATAAATATTGAGCAGTGTATAATATTTTGGtgtataaatattgaaataaagattgttgtttttatttttatgtgggACAGTGGAGTCAGTCTCTTTCTTTAGAGTATAAATTAGGGTCAGAAagtatactatactacactctGTTGTGTTATACTGAACTGTActagtactgtactgtattatgaTACTATAATGTACtatactgaactgtattatactgaagtatactgttttatacaatactgtactgtattctaCTATATTAGACAATGCTACGCTATACTAgagtatactgtactgtactgcactgtgctgtatcCTCTATAATAGCATGCTATACTGCTATACTGTACTATGCTGTACAGTAGGGATGGCaatgctccaggtttgctggatccagaggctcagctccagctccagagccacaaaaaacactgtaaacaagGATGGGATcataattttgtatgt

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway
ko04612 Antigen processing and presentation
ko05168 Herpes simplex virus 1 infection

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004691 True 1463 mRNA 0.52 7 56698321 56702513

Neighbor

gene id symbol gene type direction distance location
AMCG00004684 NA coding downstream 43236 56653182 ~ 56655085 (-)
AMCG00004682 cdc42l,LOC108433756,LOC108272678,LOC107552852,LOC105025850,LOC103039613 coding downstream 186628 56494656 ~ 56511693 (-)
AMCG00004676 NA coding downstream 255365 56424588 ~ 56442956 (-)
AMCG00004678 NA coding downstream 275415 56417056 ~ 56422906 (-)
AMCG00004677 NA coding downstream 283897 56410985 ~ 56414424 (-)
AMCG00004693 NA coding upstream 2831 56705344 ~ 56705814 (-)
AMCG00004689 NA coding upstream 33330 56735843 ~ 56738249 (-)
AMCG00004698 NA coding upstream 122508 56825021 ~ 56836934 (-)
AMCG00004699 NA coding upstream 144170 56846683 ~ 56853046 (-)
AMCG00004697 NA coding upstream 153843 56856356 ~ 56858606 (-)
G10093 NA non-coding downstream 50515 56606421 ~ 56647806 (-)
G10073 NA non-coding downstream 181907 56515501 ~ 56516414 (-)
G10068 NA non-coding downstream 206558 56489568 ~ 56491763 (-)
G10067 NA non-coding downstream 226895 56470522 ~ 56471426 (-)
G10061 NA non-coding downstream 343915 56353928 ~ 56354406 (-)
G10108 NA non-coding upstream 9876 56712389 ~ 56714188 (-)
G10116 NA non-coding upstream 50512 56753025 ~ 56754391 (-)
G10084 NA non-coding upstream 59532 56762045 ~ 56820786 (-)
G10135 NA non-coding upstream 157824 56860337 ~ 56861643 (-)
AMCG00004690 NA other downstream 6615 56690719 ~ 56691706 (-)
AMCG00004692 LOC103030083,LOC107394826,LOC101069563,LOC101467164,LOC101164413,LOC106519597,LOC108443584 other downstream 7829 56685737 ~ 56690492 (-)
AMCG00004675 chd4,LOC107724784,LOC107671917,LOC107714608,LOC107704911 other downstream 213473 56450789 ~ 56484848 (-)
AMCG00004672 NA other downstream 313451 56283994 ~ 56384870 (-)
AMCG00004665 p3h3,LOC106605089,LOC106583419 other downstream 589236 56106713 ~ 56109085 (-)
G10115 NA other upstream 45278 56747791 ~ 56750963 (-)
G10079 NA other upstream 69989 56772502 ~ 56775440 (-)
G10121 NA other upstream 74613 56777126 ~ 56778469 (-)
G10123 NA other upstream 86239 56788752 ~ 56792161 (-)
G10157 NA other upstream 323024 57025537 ~ 57028915 (-)

Expression


Co-expression Network