G10083


Basic Information

Item Value
gene id G10083
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56683137 ~ 56894619 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU12556
tgactggacactacagcacattaacactgcctgactggacactacagcacattaacactgcctgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactgactgactggacactacagcacattaacactgactgactgactggacactacagcacattaacttACTCTGCTTCTTTCAACACGAACTTGTCACACTAGACGCGATTTTTCAAACGATAACTACAATCAATGTGATAAAACCTATAATTAAGAGTATCACTCGAAAACGGAGACAATGCGGTATTTATTCGTGACGTTGTTGCCGAAAACCGCATACGTTAATACGcgtaatacaaaaaacaaaacgacaaacATCAATGACACTGTACTCCAAACATGGGGGCCGC

Function

GO:

id name namespace
GO:0019538 protein metabolic process biological_process
GO:0043603 cellular amide metabolic process biological_process
GO:0043604 amide biosynthetic process biological_process
GO:1901564 organonitrogen compound metabolic process biological_process
GO:1901566 organonitrogen compound biosynthetic process biological_process
GO:0009058 biosynthetic process biological_process
GO:0009059 macromolecule biosynthetic process biological_process
GO:0043043 peptide biosynthetic process biological_process
GO:1901576 organic substance biosynthetic process biological_process
GO:0006412 translation biological_process
GO:0010467 gene expression biological_process
GO:0044237 cellular metabolic process biological_process
GO:0044238 primary metabolic process biological_process
GO:0044249 cellular biosynthetic process biological_process
GO:0044260 cellular macromolecule metabolic process biological_process
GO:0044267 cellular protein metabolic process biological_process
GO:0044271 cellular nitrogen compound biosynthetic process biological_process
GO:0071704 organic substance metabolic process biological_process
GO:0006518 peptide metabolic process biological_process
GO:0043170 macromolecule metabolic process biological_process
GO:0006807 nitrogen compound metabolic process biological_process
GO:0034641 cellular nitrogen compound metabolic process biological_process
GO:0034645 cellular macromolecule biosynthetic process biological_process
GO:0044444 obsolete cytoplasmic part cellular_component
GO:0005739 mitochondrion cellular_component

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU12556 True 413 lncRNA 0.42 2 56683137 56894619

Neighbor

gene id symbol gene type direction distance location
AMCG00004684 NA coding downstream 28052 56653182 ~ 56655085 (-)
AMCG00004682 cdc42l,LOC108433756,LOC108272678,LOC107552852,LOC105025850,LOC103039613 coding downstream 171444 56494656 ~ 56511693 (-)
AMCG00004676 NA coding downstream 240181 56424588 ~ 56442956 (-)
AMCG00004678 NA coding downstream 260231 56417056 ~ 56422906 (-)
AMCG00004677 NA coding downstream 268713 56410985 ~ 56414424 (-)
AMCG00004704 NA coding upstream 2984 56897603 ~ 56910267 (-)
AMCG00004706 NA coding upstream 38778 56933397 ~ 56956495 (-)
AMCG00004708 NA coding upstream 80500 56975119 ~ 56982616 (-)
AMCG00004705 NA coding upstream 142868 57037487 ~ 57050034 (-)
G10093 NA non-coding downstream 35331 56606421 ~ 56647806 (-)
G10073 NA non-coding downstream 166723 56515501 ~ 56516414 (-)
G10068 NA non-coding downstream 191374 56489568 ~ 56491763 (-)
G10067 NA non-coding downstream 211711 56470522 ~ 56471426 (-)
G10061 NA non-coding downstream 328731 56353928 ~ 56354406 (-)
AMCG00004675 chd4,LOC107724784,LOC107671917,LOC107714608,LOC107704911 other downstream 198289 56450789 ~ 56484848 (-)
AMCG00004672 NA other downstream 298267 56283994 ~ 56384870 (-)
AMCG00004665 p3h3,LOC106605089,LOC106583419 other downstream 574052 56106713 ~ 56109085 (-)
AMCG00004660 LOC106605085 other downstream 674271 56006051 ~ 56008866 (-)
AMCG00004652 NA other downstream 789051 55889982 ~ 55894086 (-)
G10157 NA other upstream 130918 57025537 ~ 57028915 (-)

Expression


Co-expression Network