AMCG00004703


Basic Information

Item Value
gene id AMCG00004703
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56878405 ~ 56886798 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004703
TTGTCTAAAGCGGAAGTTCCATGTAAAATAGGCGGAGTCGACTATCGTGGTATCGCGATTACCGGGTGTGCTGCTTTAAGCTGTTAGCGTTTATCCACCAGTTTCCCACTGCTGTATCAATATAAGCACAAGCGGCCAGTGGTTTTCTTTCTCCGCCACCTACGTGCTGGCTGGTTTTTGAACATAATCGCTGTATTTGTTGGCTCTGAACAGCAGCAGCGTGGGACCATGTCGCACCGCAGACCCTCTTACCAGCGGGAAGGAGAGCTCTTCCCCCCGGCCGGGCGAACCACGTCAGCCGTCTGGGCATATTTCGGATATGTAACAAATGAGCAGGGCTGCGTTGTCGAGGATGGAAATCCAATCTGCAGAAAGTGCAGGATCCGGGTGTCCGCGAAAAGTGGGAACACATCCAACATGTTCGTCCACCTCCGAGACCAGCACCCGTCCCAGCACCGAGAAGCCCTGAGGTTAGACATGGCGGCAGCAGCACCGAAACTCGTCGACAAAGAGGGCGCCCGGAGTGAGATCTGGCATTTCTTCGGCTTCCAGGCTGCGGAGAGCGGCGGGCCTCGACACTCGGCGCCGCTGTGCCGGCGCTGCTTTAAAGCGTGCACCGCCAAGGGAGGCAACACGTCCAACCTGGCCAAGCATCTGTCGGACAAGCACCCCGAGCTGTTCAAACGGTTCAAAGCCCGGCAGCAGAGCAAAGATGCGCTGGACCCAAGACGACGCGCTGCCCGGTTCACCCAATCGGTCACACACAGCCCTGGAGGCATAAAGACGGAGCGGTGCAGTGAGGACGAGGCAGCGGGGGAGTCGCAGCCCAAGAGGCCCTGCAGCAGAGACCTCTTCACCAGCTGTGAGAGCGCCGAGCTGCGGCTCCGGCACCGGGAGGATCTGGAGCGGAGGCTGCGGCGAGCCGAGGAGAGCCACCAGAGCAACATGAGGGGGCTGCAGCAGGAGATCGCTCGCCTGCAGGGACTGGATCAGCTCGTGAATGAGGAGAAGCAGGAGATTCACAAGCACTTCCAGCAGAAGGTGGAGGAGGCAAGAGAGGAGGCTGAGAGCTCAACTGTACTGGGGGGGCTGGTGGCTATGGTGAGGGAGGTTCTGTCTCAGTTCTGGGGAAGACTGTGA

Function

GO: NA

KEGG:

id description
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004703 True 1140 mRNA 0.59 5 56878405 56886798

Neighbor

gene id symbol gene type direction distance location
AMCG00004696 NA coding upstream 34675 56841116 ~ 56843730 (+)
AMCG00004694 NA coding upstream 57616 56814414 ~ 56820789 (+)
AMCG00004687 NA coding upstream 99979 56775205 ~ 56778426 (+)
AMCG00004688 NA coding upstream 148572 56724853 ~ 56729833 (+)
AMCG00004686 NA coding upstream 158330 56712353 ~ 56720075 (+)
AMCG00004701 LOC103393816,LOC101468857,LOC106519603 coding downstream 28524 56915322 ~ 56926198 (+)
G9958 NA non-coding upstream 24554 56852941 ~ 56853851 (+)
G9957 NA non-coding upstream 26266 56849372 ~ 56852139 (+)
G9932 NA non-coding upstream 104687 56765053 ~ 56773718 (+)
G9930 NA non-coding upstream 119159 56758684 ~ 56759246 (+)
G9923 NA non-coding upstream 143017 56733305 ~ 56735388 (+)
G9942 NA non-coding downstream 21378 56908176 ~ 56954608 (+)
G9978 NA non-coding downstream 72436 56959234 ~ 56959738 (+)
G9988 NA non-coding downstream 129083 57015881 ~ 57019723 (+)
G9989 NA non-coding downstream 138714 57025512 ~ 57027870 (+)
AMCG00004700 NA other upstream 11274 56861354 ~ 56867131 (+)
AMCG00004695 gapdh,LOC107596669 other upstream 76513 56785852 ~ 56801892 (+)
G9889 NA other upstream 336342 56538254 ~ 56542063 (+)
AMCG00004681 NA other upstream 378821 56490093 ~ 56499584 (+)
AMCG00004673 NA other upstream 518608 56315612 ~ 56359797 (+)
AMCG00004707 NA other downstream 74715 56961513 ~ 57002024 (+)
G9982 NA other downstream 100108 56986906 ~ 56987644 (+)

Expression


Co-expression Network