G1218


Basic Information

Item Value
gene id G1218
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 7489445 ~ 7489881 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU1436
CTTTGACATAAATGTCATCAATCAAAGCAccattttttctatttctcaaatattattttgtatactaATGATGTTCCCATAATTTGAAGACAAATGTAATGAACTGCATGCCAATGACTGTATTCTAGCACCTGTGACACGGTAAAGCAGCTCCCTCTGGTGAGGAAACTGCAGATATCAACTGATGCTGGTGCAGAAGCACTTCAGAGAGAATGATGCCTGTCACACATCATACGTTATCAGAAAAGCAGCTCACTGGTATATGCAGGGTCCAAACACGGTCCCCAAGTTCTGCACTGACATCTTATTGGTCTCGCTGTGAGACGCCACTCGGAGCCGGAAGTGGACTAGGTGCCGGAGCAGACGCTGATGCTCTGCAGGAGGACTGTCCAGCTCAGTCTTCAGGCAACTGTTCAGATCATCCTCATCTTTACATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1436 True 437 lncRNA 0.43 1 7489445 7489881

Neighbor

gene id symbol gene type direction distance location
AMCG00003527 NA coding upstream 7239 7466921 ~ 7482206 (+)
AMCG00003529 NA coding upstream 29969 7453411 ~ 7459476 (+)
AMCG00003522 trappc12 coding upstream 50998 7422803 ~ 7438447 (+)
AMCG00003523 NA coding upstream 79316 7408545 ~ 7410129 (+)
AMCG00003516 NA coding upstream 442042 7045216 ~ 7047403 (+)
AMCG00003521 NA coding downstream 15582 7505463 ~ 7514410 (+)
AMCG00003525 NA coding downstream 28170 7518051 ~ 7531125 (+)
AMCG00003526 NA coding downstream 42672 7532553 ~ 7547554 (+)
AMCG00003530 LOC108258189,LOC103368564,LOC106533618 coding downstream 488894 7978775 ~ 7980197 (+)
AMCG00003532 rsad2 coding downstream 794946 8284827 ~ 8292218 (+)
G1187 NA non-coding upstream 123968 7364944 ~ 7365477 (+)
G1146 NA non-coding upstream 415836 7073404 ~ 7073609 (+)
G990 NA non-coding upstream 1503051 5986038 ~ 5986394 (+)
G983 NA non-coding upstream 1533625 5955604 ~ 5955820 (+)
G960 NA non-coding upstream 1659700 5829459 ~ 5829745 (+)
G1241 NA non-coding downstream 33980 7523861 ~ 7750465 (+)
G1242 NA non-coding downstream 36978 7526859 ~ 7528458 (+)
G1253 NA non-coding downstream 306570 7796451 ~ 7796854 (+)
G1271 NA non-coding downstream 785881 8275762 ~ 8276983 (+)
G1291 NA non-coding downstream 850385 8340266 ~ 8340592 (+)
G1012 NA other upstream 994540 6487692 ~ 6494905 (+)
AMCG00003480 NA other upstream 2154693 5303450 ~ 5334752 (+)
AMCG00003469 NA other upstream 2967045 4514031 ~ 4522400 (+)
AMCG00003473 NA other upstream 3034303 4452564 ~ 4455142 (+)
AMCG00003524 rps7,LOC107668222 other downstream 8159 7498040 ~ 7504015 (+)
AMCG00003534 id2,LOC106566577 other downstream 1159244 8649125 ~ 8652470 (+)
AMCG00003541 asap2,LOC106566627 other downstream 1410575 8900456 ~ 8941751 (+)
AMCG00003544 NA other downstream 1586009 9075890 ~ 9106765 (+)
AMCG00003551 NA other downstream 1765947 9255828 ~ 9263468 (+)

Expression


Co-expression Network