Gene
RNA
| Item | Value |
|---|---|
| gene id | G586 |
| gene name | mtmr9 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 3596921 ~ 3599589 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| mtmr9 | Predicted to enable phosphatidylinositol-3-phosphatase activity. Predicted to be involved in negative regulation of autophagy and phosphatidylinositol dephosphorylation. Predicted to be active in cytoplasm and membrane. Orthologous to human MTMR9 (myotubularin related protein 9). |
| description |
|---|
| PREDICTED: myotubularin-related protein 9 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU706 | True | 359 | lncRNA | 0.30 | 2 | 3596921 | 3599589 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003443 | NA | coding | downstream | 60906 | 3466802 ~ 3536015 (-) |
| AMCG00003439 | NA | coding | downstream | 181636 | 3404970 ~ 3415285 (-) |
| AMCG00003440 | NA | coding | downstream | 196237 | 3398726 ~ 3400684 (-) |
| AMCG00003436 | NA | coding | downstream | 305694 | 3290037 ~ 3291227 (-) |
| AMCG00003437 | NA | coding | downstream | 346199 | 3239884 ~ 3250722 (-) |
| AMCG00003449 | NA | coding | upstream | 109524 | 3709113 ~ 3714240 (-) |
| AMCG00003451 | NA | coding | upstream | 253558 | 3853147 ~ 3855295 (-) |
| AMCG00003461 | NA | coding | upstream | 492503 | 4092092 ~ 4120379 (-) |
| AMCG00003464 | NA | coding | upstream | 610158 | 4209747 ~ 4211902 (-) |
| AMCG00003460 | NA | coding | upstream | 618580 | 4218169 ~ 4235652 (-) |
| G578 | NA | non-coding | downstream | 71826 | 3524024 ~ 3525095 (-) |
| G541 | ccdc25 | non-coding | downstream | 168630 | 3424088 ~ 3428291 (-) |
| G500 | NA | non-coding | downstream | 385044 | 3195905 ~ 3211877 (-) |
| G464 | NA | non-coding | downstream | 485870 | 3086465 ~ 3111051 (-) |
| G458 | NA | non-coding | downstream | 538717 | 3006968 ~ 3058204 (-) |
| G624 | NA | non-coding | upstream | 263408 | 3862997 ~ 3865429 (-) |
| G664 | NA | non-coding | upstream | 321407 | 3920996 ~ 3974710 (-) |
| G667 | NA | non-coding | upstream | 376168 | 3975757 ~ 3975989 (-) |
| G707 | NA | non-coding | upstream | 682236 | 4281825 ~ 4316284 (-) |
| G708 | NA | non-coding | upstream | 682560 | 4282149 ~ 4326850 (-) |
| AMCG00003444 | NA | other | downstream | 57954 | 3536172 ~ 3538967 (-) |
| G531 | adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 | other | downstream | 166649 | 3394657 ~ 3430272 (-) |
| AMCG00003422 | NA | other | downstream | 1158100 | 2427397 ~ 2438821 (-) |
| AMCG00003423 | NA | other | downstream | 1195026 | 2397642 ~ 2401895 (-) |
| AMCG00003400 | abracl,LOC107727609,LOC107558932,LOC107553474 | other | downstream | 2639725 | 945223 ~ 957196 (-) |
| AMCG00003459 | NA | other | upstream | 276643 | 3876232 ~ 3895524 (-) |
| AMCG00003476 | NA | other | upstream | 983553 | 4583142 ~ 4808989 (-) |
| AMCG00003484 | NA | other | upstream | 1744481 | 5344070 ~ 5356468 (-) |
| AMCG00003550 | NA | other | upstream | 5409528 | 9009117 ~ 9082850 (-) |
| AMCG00003572 | NA | other | upstream | 6253610 | 9853199 ~ 9865649 (-) |
