G742


Basic Information

Item Value
gene id G742
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 4483890 ~ 4484270 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU889
ACAACAGGCAAGAAGCAAAGGTATTCATAGTTTATTTACACGAGGTGTCATTCTGTGGTAACATGGTAAAGCATGAAGCTGACGCTGAACTGAAGACAGAAACTCACCTTGagaattatataatttccagcctgttttggaataattgagtaATGGCTGCTCTTGCTAATATACATCAAGCCTATAATCAGGGCCTGCCCtgcttgttgtgtgtgtggttttaccTCATGCTCGCACTTCTACCTCTTACCTGGCATAGCAGGGCAGTCCTGGTGAAAACATCCTTCACAGCATCTCACTAAACGAAGAATCCCTCTCCATAAACACTCACACGTCAACTCATTGCTTCAGAAACAGGTTTATTGAGCTGGGAGTTCTGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU889 True 381 lncRNA 0.40 1 4483890 4484270

Neighbor

gene id symbol gene type direction distance location
AMCG00003474 NA coding upstream 12159 4471337 ~ 4471731 (+)
AMCG00003467 eif2b4 coding upstream 48423 4427711 ~ 4435467 (+)
AMCG00003465 NA coding upstream 117658 4350519 ~ 4366232 (+)
AMCG00003463 NA coding upstream 193942 4280112 ~ 4289948 (+)
AMCG00003457 fndc4,LOC107589087 coding upstream 414828 4065461 ~ 4069062 (+)
AMCG00003468 NA coding downstream 57373 4541643 ~ 4543761 (+)
AMCG00003475 NA coding downstream 205214 4689484 ~ 4695337 (+)
AMCG00003478 LOC108428732,LOC107594120,LOC107734000,LOC107552030,LOC106571024,LOC103363535 coding downstream 690745 5175015 ~ 5187273 (+)
AMCG00003481 NA coding downstream 851221 5335491 ~ 5339847 (+)
AMCG00003485 NA coding downstream 894758 5379028 ~ 5402540 (+)
G690 NA non-coding upstream 104071 4326653 ~ 4379819 (+)
G684 NA non-coding upstream 108951 4296559 ~ 4374939 (+)
G646 NA non-coding upstream 393571 4086896 ~ 4090319 (+)
G642 NA non-coding upstream 507851 3975753 ~ 3976039 (+)
G515 NA non-coding upstream 1117547 3339846 ~ 3366343 (+)
G752 NA non-coding downstream 68628 4552898 ~ 4553645 (+)
G907 kbtbd11 non-coding downstream 1066475 5550745 ~ 5556306 (+)
G908 NA non-coding downstream 1073337 5557607 ~ 5558515 (+)
G960 NA non-coding downstream 1345189 5829459 ~ 5829745 (+)
G983 NA non-coding downstream 1471334 5955604 ~ 5955820 (+)
AMCG00003473 NA other upstream 28748 4452564 ~ 4455142 (+)
AMCG00003469 NA other downstream 29761 4514031 ~ 4522400 (+)
AMCG00003480 NA other downstream 819180 5303450 ~ 5334752 (+)
G1012 NA other downstream 2003422 6487692 ~ 6494905 (+)
AMCG00003524 rps7,LOC107668222 other downstream 3013770 7498040 ~ 7504015 (+)
AMCG00003534 id2,LOC106566577 other downstream 4164855 8649125 ~ 8652470 (+)

Expression


Co-expression Network