AMCG00004792


Basic Information

Item Value
gene id AMCG00004792
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 3302503 ~ 3307925 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004792
CAATTCTTCATCGCCCTGCGCTTGGTGGCTTGTGCTCAGAATGGCTTGGAAGTAGCCCTCAAGAGCCTCGATGTGGCAGTTCCCCCACCCAAGTTTCTTGACACGAGTAGTCCACTGCTGGTGTCTGGAGCAGGGTCTGTGGACAGTCCCTGGGTGGTTAAGactGAGGAGAAACTGAAGTATGATGTCATATTTGACAGCCTTTTACCAATGAACGGCATGCTTTCAGGGGAGAAAGTTAAACCAGTTCTGCTCAATTCCAAATTACCTGTGGATGTTTTGGGGCGGGTAAGAAATAAGCCTGGTTCCTCCCTCAGTACTCTGTCGATGTTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004792 True 336 mRNA 0.49 3 3302503 3307925

Neighbor

gene id symbol gene type direction distance location
AMCG00004791 calr,LOC102308154,LOC102192544,LOC101484884,LOC107393148,LOC106512241,LOC100701980 coding upstream 40023 3251970 ~ 3262480 (+)
AMCG00004786 NA coding upstream 299578 2998006 ~ 3002925 (+)
AMCG00004784 NA coding upstream 349879 2952311 ~ 2952624 (+)
AMCG00004783 elavl4,LOC107657884,LOC106613894 coding upstream 743830 2548607 ~ 2558673 (+)
AMCG00004782 elavl4,LOC106613894 coding upstream 811813 2490454 ~ 2490690 (+)
AMCG00004795 xpr1,xpr1a,LOC106584313,LOC106613915,LOC105029208 coding downstream 224559 3532484 ~ 3556450 (+)
AMCG00004798 mfsd14a,LOC106613595 coding downstream 285475 3593400 ~ 3627243 (+)
AMCG00004796 NA coding downstream 324968 3632893 ~ 3642414 (+)
AMCG00004797 NA coding downstream 370583 3678508 ~ 3688735 (+)
AMCG00004805 cdc14a,LOC106613592 coding downstream 394560 3702485 ~ 3720008 (+)
G143192 NA non-coding upstream 66156 3234653 ~ 3236347 (+)
G143170 NA non-coding upstream 203119 3099122 ~ 3099384 (+)
G143166 NA non-coding upstream 216109 3084372 ~ 3086394 (+)
G143109 LOC103376870 non-coding upstream 540873 2720298 ~ 2761630 (+)
G143107 NA non-coding upstream 620955 2681304 ~ 2681548 (+)
G143195 NA non-coding downstream 2982 3310907 ~ 3376024 (+)
G143218 NA non-coding downstream 69144 3377069 ~ 3377271 (+)
G143237 NA non-coding downstream 273157 3581082 ~ 3588105 (+)
G143302 NA non-coding downstream 381233 3689158 ~ 3690193 (+)
G143356 NA non-coding downstream 598668 3906593 ~ 3906921 (+)
AMCG00004788 NA other upstream 142294 3123081 ~ 3160209 (+)
G143075 elavl4,LOC106613894,LOC103028496 other upstream 743423 2440541 ~ 2559080 (+)
AMCG00004749 NA other upstream 3179538 116491 ~ 122965 (+)
AMCG00004793 NA other downstream 69890 3377815 ~ 3395158 (+)
G143366 NA other downstream 641501 3949426 ~ 3949837 (+)
G143404 LOC107757485,LOC107715094,LOC107588062,LOC107653629,LOC106613586,LOC107592717,LOC107669813 other downstream 801097 4109022 ~ 4109655 (+)
G143471 LOC107575789 other downstream 1063784 4371709 ~ 4372089 (+)
G143626 NA other downstream 2115778 5423703 ~ 5424121 (+)

Expression


Co-expression Network