G143218


Basic Information

Item Value
gene id G143218
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 3377069 ~ 3377271 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU180138
actgtagacTCCTAGGCCTTTCTCATGcaatacttcatctagttctattcctcccatagtgtaattatagtggacatgtttgttacctgcatataataccttgcacttgtccacattgaatttcatctgccaggtgtcggcctgctagtccctttagtacctcctcctcatttatcctgatctctcttagggtttgactggac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180138 True 203 lncRNA 0.43 1 3377069 3377271

Neighbor

gene id symbol gene type direction distance location
AMCG00004792 NA coding upstream 69144 3302503 ~ 3307925 (+)
AMCG00004791 calr,LOC102308154,LOC102192544,LOC101484884,LOC107393148,LOC106512241,LOC100701980 coding upstream 114589 3251970 ~ 3262480 (+)
AMCG00004786 NA coding upstream 374144 2998006 ~ 3002925 (+)
AMCG00004784 NA coding upstream 424445 2952311 ~ 2952624 (+)
AMCG00004783 elavl4,LOC107657884,LOC106613894 coding upstream 818396 2548607 ~ 2558673 (+)
AMCG00004795 xpr1,xpr1a,LOC106584313,LOC106613915,LOC105029208 coding downstream 155213 3532484 ~ 3556450 (+)
AMCG00004798 mfsd14a,LOC106613595 coding downstream 216129 3593400 ~ 3627243 (+)
AMCG00004796 NA coding downstream 255622 3632893 ~ 3642414 (+)
AMCG00004797 NA coding downstream 301237 3678508 ~ 3688735 (+)
AMCG00004805 cdc14a,LOC106613592 coding downstream 325214 3702485 ~ 3720008 (+)
G143195 NA non-coding upstream 1045 3310907 ~ 3376024 (+)
G143192 NA non-coding upstream 140722 3234653 ~ 3236347 (+)
G143170 NA non-coding upstream 277685 3099122 ~ 3099384 (+)
G143166 NA non-coding upstream 290675 3084372 ~ 3086394 (+)
G143109 LOC103376870 non-coding upstream 615439 2720298 ~ 2761630 (+)
G143237 NA non-coding downstream 203811 3581082 ~ 3588105 (+)
G143302 NA non-coding downstream 311887 3689158 ~ 3690193 (+)
G143356 NA non-coding downstream 529322 3906593 ~ 3906921 (+)
G143380 NA non-coding downstream 706828 4084099 ~ 4089273 (+)
G143403 NA non-coding downstream 724991 4102262 ~ 4103856 (+)
AMCG00004788 NA other upstream 216860 3123081 ~ 3160209 (+)
G143075 elavl4,LOC106613894,LOC103028496 other upstream 817989 2440541 ~ 2559080 (+)
AMCG00004749 NA other upstream 3254104 116491 ~ 122965 (+)
AMCG00004793 NA other downstream 544 3377815 ~ 3395158 (+)
G143366 NA other downstream 572155 3949426 ~ 3949837 (+)
G143404 LOC107757485,LOC107715094,LOC107588062,LOC107653629,LOC106613586,LOC107592717,LOC107669813 other downstream 731751 4109022 ~ 4109655 (+)
G143471 LOC107575789 other downstream 994438 4371709 ~ 4372089 (+)
G143626 NA other downstream 2046432 5423703 ~ 5424121 (+)

Expression


Co-expression Network