G113393


Basic Information

Item Value
gene id G113393
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 25738554 ~ 25738867 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU141998
cccagtctgaggtccagagtgctctggagcaggttttcatcaaggatgtctctgtacattgctgcattcatctttccctcgatcctgactagtctcccagttcctgccgctgaaaaacatccccacagcatgatgctgccaccaccatgtttcactgtagggatggtattggccaggtgatgagcagtGCCTGGCTTCtgttctgtacccttccccagatctgtgcctcgatacaatcctgtcttggaggtctacagacaattccttggacttcatggcttggtttgtgctctgacatgcactgttaactgtgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141998 True 314 lncRNA 0.51 1 25738554 25738867

Neighbor

gene id symbol gene type direction distance location
AMCG00006913 NA coding downstream 2673 25725239 ~ 25735881 (-)
AMCG00006909 LOC108442871 coding downstream 66811 25545313 ~ 25671743 (-)
AMCG00006908 NA coding downstream 220231 25516575 ~ 25518323 (-)
AMCG00006907 LOC108442871 coding downstream 290142 25400710 ~ 25448412 (-)
AMCG00006906 LOC107656325,LOC106609811,LOC107658849,LOC107572035,LOC107726030 coding downstream 425113 25309625 ~ 25313441 (-)
AMCG00006914 NA coding upstream 8269 25747136 ~ 25778618 (-)
AMCG00006915 atp6v1e1,LOC107085735,LOC100708725,LOC102197685,LOC102784574,LOC101477634,LOC106514808,LOC106914460 coding upstream 99888 25838755 ~ 25847485 (-)
AMCG00006920 NA coding upstream 149390 25888257 ~ 25893080 (-)
AMCG00006919 NA coding upstream 160684 25899551 ~ 25911582 (-)
AMCG00006918 NA coding upstream 198840 25937707 ~ 25949127 (-)
G113391 NA non-coding downstream 18979 25719362 ~ 25719575 (-)
G113390 NA non-coding downstream 19762 25718417 ~ 25718792 (-)
G113389 NA non-coding downstream 21567 25716525 ~ 25716987 (-)
G113375 NA non-coding downstream 339856 25395536 ~ 25398698 (-)
G113374 NA non-coding downstream 346236 25391796 ~ 25392318 (-)
G113395 NA non-coding upstream 2201 25741068 ~ 25745985 (-)
G113431 NA non-coding upstream 127518 25866385 ~ 25867279 (-)
G113468 NA non-coding upstream 256774 25995641 ~ 25995929 (-)
G113479 NA non-coding upstream 262579 26001446 ~ 26038323 (-)
G113573 NA non-coding upstream 1320502 27059369 ~ 27059594 (-)
AMCG00006866 NA other downstream 2167421 23568155 ~ 23571133 (-)
G113050 NA other downstream 2331347 23404175 ~ 23407207 (-)
AMCG00006854 NA other downstream 2780248 22953176 ~ 22958306 (-)
AMCG00006841 NA other downstream 3540890 22130495 ~ 22197664 (-)
AMCG00006813 NA other downstream 4773992 20854057 ~ 20964562 (-)
G113530 NA other upstream 761148 26500015 ~ 26500681 (-)
G113645 ptn,LOC106609498 other upstream 1663733 27402600 ~ 27527348 (-)
G113775 LOC100846954 other upstream 2528395 28267262 ~ 28292598 (-)
G113833 NA other upstream 2972352 28711219 ~ 28812548 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G117139 NA non-coding CI01000021 null 2869945 ~ 2870273 (-)
eurasian perch (Perca fluviatilis) G98621 NA non-coding NC_053120.1 CM020917.1 27164927 ~ 27165335 (-)