AMCG00006918


Basic Information

Item Value
gene id AMCG00006918
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 25937707 ~ 25949127 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006918
ATGGATTTACGGATTTCTTTAGGGTGTGGACAGTGTTGTCTCTCCATGGCCCGAGTGCTGAAAGTCCTGCAGACCCTCAGGAATCACTGGAAGAAGTCTTTATTCGGAGCCAGCGTCGTCTCCTATGGAGGACACTTGCTCTATGGAAAGCATTGTGACAACCTATTGCGGAGGGCAGCTTGTCATGAAGCTAGGgaGTTTGGCAGGCAGGTGATACCAGCACACATGCTGGTCAAAAAGGCCACAGTGATTCTCAACCCAGCTGCTTGTAATAGAAAGGCTGCCAACCTGTTTGAGAAAAATGCCGCACCCATATTGCACCTGGGTGGTTATGAAGTGACGTTGGTGAAGACAGATTATGAGGGCCAAGCGAAGAAGCTGCTTGACCTGATGGAACCGACCGACCTCCTGATTGTGGCCGGAGGAGATGGCACCCTGCAGGAGGTAGTAACTGGACTGCTGCGAAGACCCGATCAGgcaTCCATCAGTAAGACTCCCATTGGTTTCATACCCCTGGGCTCCCAAAATTCCCTGAGTCAAACTCTGCATTCTCCCAGTGACAACAGGGTGAAACACATCACAGATGCCACGCTCTCTATCCTGAAGGGAGACACAGTCCCTCTCGACGTGCTGCAGATAAAGGGGGAGAAAGACCAGCCAGTGTTTGCCTTGACTGCGTTACGATGGGGCGCGTACCGAGACGTAGCAGCCAATGTTAGCAAGTATTGGTACCTTGGACctttaaaatcaaaagcagCTCATTTGTTCAGTACATTAAAGGAGTGGCCACAGAGCCATAAAGCCTCCTTGACATACCAGGGCCCTACACCGCGACCCCCAGATCTCACTGAGaagcccccccgccccccactcCTCACCCGGATTATCAACAGGCTGTCACTCTACTGGGCACCTCCAGAACAAGAAGTTCCACAAGAACCAGAGCCTTTGGAAGAGGTGGAAGTGTCAGCGCGCACAGAAGATGCCCTGACGGTCTGTGTGGAACCTGACACTCTCAGTAAAGGAGATTTTATTTCTACTGGGAGCATAAAGATGAAGGATCCGTCCATGTGTCCAGAGAGTGCACTTCAGCTGATGGCCAGTCGCTTGCACCTCAGTCTGCCACAGGAGGGAGCCGGTTTCTATAACATTGACAACGAGGCATACGAGGCCATGCCAGTGGAGGTCATGCTGTTACCACGGAAACTCCACTTCTTCTGCAACCCAGCTCGCAAACAGGAGCTGCTGAGTGAGGCCcagtgatggagagagagagagagggcggcCGACACAGGACTGGCGTAACAGTAATGCTGCCTTACCCGGAGAAGAGAGTTTGGTCTTCATAGTCAAAAGGCCAATTCAAGTAGCATTGATGGCTTCCAATGGTTCCAGTTGGCCAGGCCTCTTGCTGAATAAGTATTTCATGAAGATATTGAAACCTGGCAGAGCAAACAAACGgaaaaaaccaacaaaatagCTATACataatacttttaatttcaTAGCTCGTCGAACTGAAGATCTCTCTTCAAACACAACAGGGTGTTGTTCAATGAGGACAGGGCGAAGCTTTGATTTGCCATGAATCTCATCTCGGAGCAGAGAGTCTTACTGGAGTGTTCTGACAATGGAAGCTCACCACACAGTGCATCAGCTGAAAACAAAGAAGCCTACTTCACCACTGAAATGGAGCAAAATACTTCTCTAgtaataatttagaaaaatatccAAGTTTATTGAGCCtttattcaaaaacattaaatgtatggGAAGCATCTATtgacttttccatttgtttcatAGCTTATACATGTCTAAGAAATGTCCCATAGTTTCACCTCTACGTGTGTAGTACAAATCTGTCAGATCTAATTAAGAAAGGAAAAGGGCACCATTCGACATTCTAgaatttacaatttacttttttgAATGAAACTAACATGATGCATGATTTGTTATCCTTTCTctctgaattaaatatatttaaaatgtgtagttgaatgtgatttaatttatgtGTTCAATAAAGAGtaatttgcttgttttgaaagcatctCTGGAAGGGAGGGCAGTTGGCCACTGATCATCAGTTGAAtagtgaattatttaaatagattaCAGCTGCTCGATTTGATCACAAATTCAAAGATTTGGTATTTCATTAAAGACGAGCCTTGGTTTTCATTCTAAATGTTAAagacacaaactgacacacaccaTAACTGAGGACTCTGAATATAGTATTCATAgagtaaaaatatattacagcagtattttgatttagaaaagaaaaaaggtttttatttatttttttacatcagtaaataaaacatacgTTCACTGCTTGGAGAAAAAATCCAGGCAGTTACTCTTTATCATTCTATTTGGTGGCtcagtttgttttaacttttgatctccctaataataataataataataaataaagttcaGTCCCTTCTTATTTTAAAGCTATTGTATTAAAACTGTAGGGGTTAATATATGGGGTTTGTGGTACATCTGGTATCGGTAAGCATGCACAGTGCAGGTATTGAGGGATTTTTCTTGTAACTTTAAGCGAATACTAGGCATGTTATATCACACTGTCAGATAATTTGGTGGGTTAGGTGCAGTGGTAGCCTTATAATCATTCATCTATACTGCAGTTAAAATATCCATCTAGTAATGGcatgcaaaatgtgtttattaatagcTCTGTAAATAAAAAGGGACCAACTTTGTAATCATTTGATAGTAAGtacaatgtgaaatattgtCCGGCTAATGAAAGGCAAATAATACATCACTTTTGAATGGTTACATTCCCTTTTAAGTACAGTAGTATCAAATACAGTTGTAGTACAGAGACAgatacagcaaacaaacaaaaaaacgaagCCAACAGACTGGTCAGACACTTGGTATGTTTCCTATTTACTGTTTGCCTCGCAATACATTTTGGTGtagacaattaaaatgaattacattaatttaaagtaaataaatagaattattgcttaacagaaaatatacagtccttgactattaaaaatgttaaaataaatacaaactcttTTTCCTGCTAAGCAAATCACTCCCCCAAAGGCAgactattttttttcccaaatggaAACTCACAGGGAGAACTACTTGACAGCACTTTCTGGGTACCTGATTCAATTACTGTGGGTGGCGGTTCCACATCTCTGTGGCTGCTCTGCAGCTGGTCTTGACTATGCAAGATACTTTATGAGGATAGCTAACCGGGATGGTgttgcatttcaatatatttaatatgcagACTTCAGTTTTCAATGGTTTAATCTGACTACATCACTCCTTGGTCTGCTGCCCTCTAATTGCCAGTgatctgtttaatttaaatataaactctATAAGCAGTGTCCCTAACAGTGTTAGTGGGGTATTAAAAGGATCTGAAGTAGAAAAGGGGTGTTACAATACACAACACTCACAAGGTAACAGATATCCTGCATTTCTGTTATGCCGGACATGACTTTAACGACTGGCCACTGACTGGTTTTGGAGCAGATGGTGATATTGGACAACTCCAATTCTTTAATTTGGAATGAATGCATCTGCCCACTACttctcttttaatattttaaaatatctatatcttttgttttcctttggtGTATTCATCATTAAATGGGTGGATCATAGAAACTCATATAGCTTAGAATTCTCTACCTTAgtatattaaagaaaattattatttgaagattattgtacatttataataGGATACAGAGATCTTGTGCTGTAGACAGCTTTGCATTCCAGTTTCTTGCACTGTTTATCTATAATCATTTCAACATTTGTATAATCCACctagtttaattgaattaaacctGAAAAGTGAAATTTCTTCCCCCATTTCTCATAGTCTGCATTAGaatcaacaacagaaaacaaagaatgcCCACGCTAAAGGTAAAAACAGCAGTGCACAGTCACCAATAAGACACAGTGCAAAAAGTAACACTAATGATCACCAGGGCAGGGTAGACCTCCATTTCAGTTTCCCATCGACTTCTCAAGTGACAGACACTAGTCAATAAATACACTGTTAAAAACTCAATAAATactcttctctccctctgatGCAGACATGAAGCAGGCCTTGTCAGAGAATAGCTCGCAGTTTTACAAGCAAAGATGCATACAGTTTTAGGTTTTTTCCCCCAACACTGCAAAGAATGAGCTCCAATCTGTATATAATGTTCTGTAAGTTCATTTGTAAATTCATCAACATTAATTCAAATCCCTCAGTTTGTGGACATTGAGGATTTGTAAAAGAATTATGATGctttacacatttttgtgtttttcagcagAGATCTCAGTGCTCTACAGAAAGGACATTTCTGATGATCACTCAAAGGAGGagaatcattatttaaattaaattaaaatacagcaatacCATTATAAAAGCTCATGGATGGTTCACCATTCTCTCAGATCACTTTTCTaagattttcacatttcatcactTACTCTTTACCTTATAACATTAGCTGAAaccttttacacattttctattttccatCATACCCATACCCTTCCTAAACTACCTTTATTATAGAAGTCAACAAGCAAGCTGGAGTTCTCATTATTTTGCAAGTAATCCAAGTCTTTCACATTTATACAGACCTCTCCTGTTTGGACATGcacaatttacacacacacacacacacaaatcaaactTCTCATACTGGTATTGTAGTGTTCAAAATTTGctgagaaaaaatacaacataaaaaagataacaccaacaaaaatgaatggttacatggattttagtttttcaccTGAAAATCTAATATTCCCTGGAATAAAGcctttacaaatattttgagattttcCATAAACTCTTGTAGCAACACAATTGCCAGCATCATCTAGTGCACACATTCCAGGACAGTGCATGACACAAGCCTTCCTTAAACTACGTGTTGGACTGCTTTGATATGCAAAAATTGAACGTGAACCTGGAGAGTCTATAATCCTAGGTGATTTAAGTACTGAGCTGGC

Function

GO:

id name namespace
GO:0044237 cellular metabolic process biological_process
GO:0016020 membrane cellular_component
GO:0005739 mitochondrion cellular_component
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K09881 AGK; acylglycerol kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006918 True 5060 mRNA 0.39 16 25937707 25949127

Neighbor

gene id symbol gene type direction distance location
AMCG00006919 NA coding downstream 26125 25899551 ~ 25911582 (-)
AMCG00006920 NA coding downstream 44627 25888257 ~ 25893080 (-)
AMCG00006915 atp6v1e1,LOC107085735,LOC100708725,LOC102197685,LOC102784574,LOC101477634,LOC106514808,LOC106914460 coding downstream 90222 25838755 ~ 25847485 (-)
AMCG00006914 NA coding downstream 159089 25747136 ~ 25778618 (-)
AMCG00006913 NA coding downstream 201826 25725239 ~ 25735881 (-)
AMCG00006922 NA coding upstream 27363 25976490 ~ 25993105 (-)
AMCG00006923 NA coding upstream 143770 26092897 ~ 26105386 (-)
AMCG00006925 NA coding upstream 185044 26134171 ~ 26140819 (-)
AMCG00006924 NA coding upstream 235124 26184251 ~ 26185762 (-)
AMCG00006926 NA coding upstream 243262 26192389 ~ 26361451 (-)
G113431 NA non-coding downstream 70428 25866385 ~ 25867279 (-)
G113395 NA non-coding downstream 191722 25741068 ~ 25745985 (-)
G113393 NA non-coding downstream 198840 25738554 ~ 25738867 (-)
G113391 NA non-coding downstream 218132 25719362 ~ 25719575 (-)
G113390 NA non-coding downstream 218915 25718417 ~ 25718792 (-)
G113468 NA non-coding upstream 46514 25995641 ~ 25995929 (-)
G113479 NA non-coding upstream 52319 26001446 ~ 26038323 (-)
G113573 NA non-coding upstream 1110242 27059369 ~ 27059594 (-)
G113586 NA non-coding upstream 1206408 27155535 ~ 27155857 (-)
G113587 NA non-coding upstream 1216052 27165179 ~ 27165398 (-)
AMCG00006866 NA other downstream 2366574 23568155 ~ 23571133 (-)
G113050 NA other downstream 2530500 23404175 ~ 23407207 (-)
AMCG00006854 NA other downstream 2979401 22953176 ~ 22958306 (-)
AMCG00006841 NA other downstream 3740043 22130495 ~ 22197664 (-)
AMCG00006813 NA other downstream 4973145 20854057 ~ 20964562 (-)
G113530 NA other upstream 550888 26500015 ~ 26500681 (-)
G113645 ptn,LOC106609498 other upstream 1453473 27402600 ~ 27527348 (-)
G113775 LOC100846954 other upstream 2318135 28267262 ~ 28292598 (-)
G113833 NA other upstream 2762092 28711219 ~ 28812548 (-)

Expression


Co-expression Network