AMCG00007138 (dgkz,LOC106561949,LOC106587110)


Basic Information

Item Value
gene id AMCG00007138
gene name dgkz,LOC106561949,LOC106587110
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 5166895 ~ 5209036 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007138
ATGGATACGTTTTTCCGGCGGCACTTTAAGAGGAAAGACGCGGCAGCAGCATGTGGGACCGGGGCAGAGTACTGCCGGCACCGGCGCCCCAGCGTGGCTGTGCCCACCAGCAAGGCCCGGAGGCGCTCCAGCGCGGGGCTGCCCTCGGCCGTGCTGACCCAGCGACGCCGCTCCAGCGTCCAGATGCAGGGGTTGCCCCTGGTGGCTGGCACTCGGTGCCCGGGGGGGAGCCGGCTCCTGAAGCCACACCAGGGCCGGCGCCGGTCCAGCACCACCACGCCCGGCCTCAACCCGCGCTTCGCCGTGCGCAGGAAGCGCGGCGGCCGGCAGCGCACCATCGACACGCACTTGCTGGGGCCCTCCATGCTGCTGGCCAGCCTCATCCAGatgacggaggaggaggagaacggCTCGGCGCCGGCCGGGGAGCGGCAGATCGAGATGCGGCAGGAGGGCAAGAAGAAAGCCCCTTCGTACTCCGACTCAGAGGGGGACAGCCCCGGATCCAGCACCGAGTCAGACGacgaggatgaggatgaggaagaggacGAGGACGATGAGGACGGAGAGGAAGAGCGACCGCGCTCCTTGGAGCTGGACAGCTGGAGTGAGGTCTCTGTGTCGGACCGGGAGTTCGAGGACACGGCTCTCCCCCCAGACGTCTGCCGAGGGCTGGCGATGGAGGACATCCACTCCAAGCCCCTGATCCGAGCCCCCCGCTGCCTGCGGAGGAACTCCTCGCACCTGCTGCCGGCCGAGGCCGTGTACTATGGCAAGACGTCTTACGGGCTGTACGGGAGATACCGGAGGACCAGCCAGCGGCGCTGCTCCAACGGCTCCCTGGGCACGGGGGGCCGCAGGATCTCCACTGTGTCCCAGGCCGGCAGCCCCTGGCCCGGGAGGGGGGTCCCACTGCCCAGCCGGCGTTCCTCGGTGGCAGCCCGCCGGGCATCCATGTCTCTATACCGCAACTGCTCTGCCTGCTGGAGGCCCAACGGCCGGAGGAGCTCCCTCAGCCCCCTGCCAGGGACCTACTACGACCCGCGGATCGAGACTTGGAGTGGGTTTCTCTCGAAAGCTATCGCTAAGTCTGGACTCCAGCATCTTGTGGCCCAGCCGAACCCCTCGGCCACGGTGAAGTGTGACCCGGACCGGGAGATCCGCAGCACCGTGGACTGGAGCGAGAATGCTCTGTACGGAGAGCACATCTGGTTCGAGACCAACGTCTCCGGGGATTTCTGTTACGTTGGAGAACAGCATTGCATCGCGAAGGCACTGCAAAAATCTGTCCCTCGGAAGAAGTGCGCCGCCTGCAAGATAGTGGTCCACACCCCCTGCATTGAGCAGCTCGAAAAAATCAATTTTAGGTGTAAACCCTCGTTTAGGGAATCTGGGTCGAGGAATGTGCGAGAGCCAACGATTGTCCGACACCACTGGGTTCACCGGAGGCGTCAGGAGGGGAAGTGTCGGCAGTGTGGAAagGGTTTCCAGCAGAAGTTTGCCTTTCATAGTAAAGAGATTGTGGCCATCAGCTGCTCCTGGTGCAAACAAGCATATCACAACAAGGTGACGTGCTTCATGCTGCAGCAGATCGAGGAGGCCTGCTCCCTGGGGGCCCACGCCGCCGTCATTGTCCCCCCCACGTGGATCATCCGCGTGCGGCGGCCCCAGacttcTCTGAAGTCAAGTAAGAAGAAAAAGCGCACATCATTCAAACGCAAATCCAGCAAGAAAGGAGCAGAGGAGGCGCGATGGAAGCCCTTCATAGTGAAACCCGTCCCCTCGCAGCTCATGAAACCGCTGCTGGTGTTTGTGAATCCTAAGAGTGGTGGAAATCAGGGAGCGAAGATAATCCAGTCCTTCATGTGGTATCTCAACCCCCGGCAAGTGTTTGACCTCAGCCAGGGAGGACCCAAAGAAGGGTTGGAAATGTATCGCAAAGTCCACAATCTGCGGATTCTGGCGTGTGGAGGAGACGGCACCGTGGGCTGGATCCTGTCCATTTTGGATCAGTTGCAGCTCAACCCTCAGCCGGCTGTTGCTGTTCTTCCTCTCGGCACTGGCAACGACCTGGCCAGGACGCTCAACTGGGGCGGGGGATACACGGACGAGCCTGTCTCCAAGATCCTCTCTCACGTGGAAGATGGGAATATAGTGCAGCTCGACCGCTGGAACCTGGTGGTGGAACCAAATGTGGAGGCCAACCCAGAAGACAAGGACGAGACTGCGACGGATAAGCTTCCTCTGGACGTCTTCAATAACTACTTCAGTCTGGGCTTTGATGCACACGTGACCCTGGAGTTCCACGAATCGCGAGAAGCCAATCCCGAGAGGTTTAACAGCCGGTTCAGAAATAAGATGTTTTACGCCGGGacGGCCTTTTCTGACTTTTTAATGGGCAGCTCCAAAGATTTAGCCAAGCACATCAAAGTAGTGTGCGACGGTTCAGATCTCACGTCAAAGATCCAGGACTTGAAACTGCAGTGTTTAGTGTTTCTTAACATCCCCAGGTACTGTGCCGGCACCATGCCCTGGGGTAACCCCGGCGAACACCACGACTTCGAGCCGCAGCGACACGACGACGGCTGCATCGAGGTGATCGGCTTCACCATGACGTCGCTGGCCGCTCTGCAGGTGGGGGGCCACGGGGAGAGGTTGAATCAGTGCCGGGAGGTGACTCTAACCACGTTCAAGCCGATACCCATGCAGGTAGACGGGGAGCCCTGTAAACTGGCTCCCTCCACTATTCGCATCTCCCTGAGGAACCAGGCCAACATGGTCCAGAAGACCAAGAGGAGGACCTCCATCCCCCTGCTCAACGACCAGATGCCCATCCCCGATAGACTGCGCATCCGGGTGAACCGCATCAGCATGCACGACTACGAAGCCTTGCATTACGACAAGGAGAAGCTGAAGGAGGCCTCCATCCCATTGGGTCTTATCGTGGTCCCCGGGGACAGCGACCTGGAAACGTGTCGCTCTCACATAGAGAGGCTGCAGGAGGAGGGTGACGGTGCAAAATCTAAAAACCTGTCCTCCCAGAAGCTCTCTCCCAAAAAACACGTGCCCCCGCTCCAGATGTTCTTTAATGAAATAGAGCATCTGAACTATGTGACCGAGATTTCCCAAGACGAGCTGTTCATCCTCGACCCCGAGCTGGTGGTGACGGAGACGGTGGGCACCTCCCCGGGAATGCCAGACCTCGTGGATTCTTCCGGAGAATTCCCGAGCACCGGGGGGCGGCACTTTGCATTCCCACCGTCCTCTTCTCCGCCCTCCTCCCCAGTGCCCAGCCCGACCAGCCCGCACTCCGACAGCGAGGCCTTGGCTCGGCGACACAAGAagtctctcttcttctctcacTCCGGCTTCCCCTTTCCTGTCAAGAAGAGGATCCTGGAGTTACAAAAGGCCTCGCAGCGGAAGCGTATTTCTAGCGATAGCTCGGTTGCCGAGGCACTGGCTCACAGCGACTCTCTGAGGTCCACAAAGCCGCCCCTCAGCAGGTGA

Function

symbol description
dgkz Enables diacylglycerol kinase activity; lipid kinase activity; and protein C-terminus binding activity. Involved in several processes, including glycerolipid metabolic process; lipid phosphorylation; and positive regulation of 1-phosphatidylinositol-4-phosphate 5-kinase activity. Located in cytosol; lamellipodium; and nuclear speck.

NR:

description
PREDICTED: diacylglycerol kinase zeta-like isoform X10

GO: NA

KEGG:

id description
K00901 dgkA, DGK; diacylglycerol kinase (ATP)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007138 True 3510 mRNA 0.60 27 5166895 5209036

Neighbor

gene id symbol gene type direction distance location
AMCG00007136 dgkz,LOC106561949 coding downstream 14913 5149203 ~ 5151982 (-)
AMCG00007137 NA coding downstream 45530 5113262 ~ 5121365 (-)
AMCG00007129 NA coding downstream 208225 4948505 ~ 4958670 (-)
AMCG00007131 NA coding downstream 235273 4925129 ~ 4931622 (-)
AMCG00007133 NA coding downstream 246285 4918537 ~ 4920610 (-)
AMCG00007140 NA coding upstream 93015 5302051 ~ 5304131 (-)
AMCG00007139 creb3l1 coding upstream 99379 5308415 ~ 5319239 (-)
AMCG00007145 LOC107722349 coding upstream 229226 5438262 ~ 5447370 (-)
AMCG00007149 NA coding upstream 262068 5471104 ~ 5485827 (-)
AMCG00007153 f2,LOC107554629 coding upstream 280159 5489195 ~ 5493804 (-)
G21462 NA non-coding downstream 34353 5132328 ~ 5132542 (-)
G21423 NA non-coding downstream 139169 5027202 ~ 5027726 (-)
G21419 NA non-coding downstream 203335 4963357 ~ 4963560 (-)
G21418 NA non-coding downstream 207142 4959516 ~ 4959753 (-)
G21414 NA non-coding downstream 221175 4942071 ~ 4945720 (-)
G21522 NA non-coding upstream 286313 5495349 ~ 5495735 (-)
G21535 NA non-coding upstream 305950 5514986 ~ 5515971 (-)
G21537 prdm11,LOC106560765 non-coding upstream 308191 5517227 ~ 5518751 (-)
G21536 NA non-coding upstream 312579 5521615 ~ 5523677 (-)
G21550 NA non-coding upstream 350558 5559594 ~ 5562208 (-)
G21429 NA other downstream 109489 5056787 ~ 5057406 (-)
G21426 NA other downstream 117375 5041659 ~ 5049520 (-)
AMCG00007091 ckap5,LOC108269026 other downstream 1666225 3476068 ~ 3500670 (-)
AMCG00007072 NA other downstream 2503246 2644905 ~ 2663649 (-)
AMCG00007059 NA other downstream 2970040 2142675 ~ 2196855 (-)
G21632 psmc3,prs6a,LOC107758446 other upstream 607773 5816809 ~ 5820284 (-)
AMCG00007173 madd other upstream 798604 6007640 ~ 6054064 (-)
AMCG00007201 NA other upstream 2115388 7324424 ~ 7342341 (-)
G21942 NA other upstream 2290411 7499447 ~ 7506875 (-)
G22200 NA other upstream 3184160 8393196 ~ 8396224 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_033940 dgkza coding NC_007118.7 CM002891.2 38962207 ~ 39157394 (+)
grasscarp (Ctenopharyngodon idella) CI01000026_11012960_11021926 NA coding CI01000026 null 11011340 ~ 11021926 (+)