AMCG00007205


Basic Information

Item Value
gene id AMCG00007205
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 7408648 ~ 7423202 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007205
ATGACCTCAGCCGACCATGAAAGCTGTGGTTGGACTGGCCCCGCGGTGGGAACGGGTCACCAACTCGCCGAGGAGCGCCGGAGCGCTGTGAACTCGTCAGGCCGAGGCGGGCTCGGGCGCGTGGGTGTGGCTGCGCCACGCTGTGcagtgcgCCTATTAAAAGGCCCTGGTCAGGCCTGTGTGAGCTGCCGGGTCGGGGGTGGGACAGCCCTGAGTCACGCTGTGTTCCTGCCAGGCTGGGGGGGCTGGGGTAGAGAACGGCATGTGCCCTTGGGGAGGGAAGTCATCCCTCGACTCACTATCTGCTCCTCACCCTGTATCTCCGGCACTGCAGCCCGCTGCCAGACGTGTCTCTCCTCTAACAGACGCTCTTCTCTGCCTGTAGAGTACGGCGGCTCGTCCACCATGCGATACTCCACCTACACACCGGGCTTCAGCTCCAAGTCCCAGATGTACACGTCCAGCCGGGCGGTCGCGCTCCTCTCCATGGCCATCTTCAGGAGCTGCAGAGGCGGGGGATTTAACTCTTTTATTAATCTCTTCACTGTGGAAAGGGCGTCGCTTCCCCAGCACTTGGACATGGCTGGAATTGCAGCCTCAACACCAGAAAGCAGTAGCTGGGACAAACCCACGAGGCACGGCAGGCCGATCCCACGAGACGGGGCCGGGCCGGACCCTCGGCTCCACATTCCTCACGGCCCTCGGAACGGCACGGAGAACAtctgtttaatttctttATCTGGCAGGAACAAGACTAATGCCATCCATCCCAAATCCAACAACACCGGGACTGTATACCTGCACTGGCCTGGAACCACAACCTGTCACAAGATATTGATGTTCATGTTCGCACTCTTTGCCCCAGACAAACCTCTGCCCTCTCCCCGAGTGTCTGGGCTCGGGCTCTGTGGGTCTgCGCCGCGGGGGTCCCAGTACGGCAACGGCACAATGCGCGGTGGGGGCGGCTTCTCGTCCCGCTCGGCCGTGGACTTCGGGCAGCGGCAGAAGGTCAGCATGGGGGGGAGCGGCATGATGCAGCAGGGCGGCTACCAGACCCGGCAGACGGTGATGCGCTCCATGAGCCGGGCGGGaggcgggggcgggggcgggggcaggGGGCCAGACCTGGACACGATGTCCATGCGCTCCCTGCAGCTGCGCAGCCTGCCCCCCCAAGTCGCCGCGGTCAACAACTGGAGGGACGACAGTGAGGGCAGCCTGGTCTCGGACCGGGATGCCACCGTGAACCGCCACTCCATGTACAGCACAGTCACCGACGGCGGGTTCTATGGCGCCGGGGGTGGGGCGGCCGTGCGGCAGGTGGGCGGCTCTGTGTCCACCATGCGCCGGTCCCTGAGTGGCACACTGAGCCGGGCGGCTGGTGGGGAGATGATCGTGGCCCAGGAGGAGTTGCCCCCACAGCAGTCCTACAAGGGCCCGGCTTACCGCACCATCAGCCGCATCAACCAGCGCAGGACCCAGACCAGCTCGGCGATGGCGGGCGGCGGAGGGATGTACCAGGCGGGGTCCATGAtggggggcggtgggggggtgTACCAGTCATCCTCCGGGGGCCAGATGCTTGTGAATTCCATCCCCCGGGCCATGTCTGTGAAGAGCCTGCACAGCGTGGGGAGGGGCATGGACGTGTTCGATGGAGAGATGGACATGATGGGCATGAACGAGGGGTTCACCAACCTGACCATGCCCACGGCCATCAGTTACCTGTCCCAGCCGGACCCGGAGATGCAAGTGCTGGGCTCAGCCTTCATACAGCACGAGTGCTACCACAACAACGACGCCAAGAACCAGGTGCGTCTCATGAAGGGCATCCCGGCGCTGGTGAAGCTGTTCAACAGTGAGAACCAGGAGGTGCAGCGCTACACCACGGGCGCCATGCGCAACATCATCTACGAGAACATGGACAACAAGACGGGGCTGATCGAGGCGGGCGGCGACAGTCTGAAGGAGAAGCTGGCGAGGGACACCCTGGCCGACCTGACCGAGCACATCCTGATCCCGCTGTCCTCGGACTCGGTCACCCAGAGCGCCTCGGAGACTGAGATCTTCCTCAACACCACGGGCTGCCTCAGGAACCTGAGCTCGGTGAACAGCCGGACCCGGCAGCAGATGCGGGAGACGACCGGGCTGGTGGACGCGCTGGTGGAGTACATCCAGAACTCCCTGGAGAACGGGAAGGCCGAGGAGAAGGGCATGGAGAACGCGGTCTGTGTGCTGAGGAACCTGTCCTACCAGCTGTACGGGGAGCTGCCCCCCTCGACCATGGCACGCCTGGAGGGCCCGAGCCGGGGGCAGGGGGCTGGGGGCAAGGGCGACGCCATCGGGTGCTTCACCCCACAGAGCAAGAAGGCCAAAGAGAGGCAGAACCAGGACCTGTCCACGTTCACTGAGGTGATCAAGGACCCCCAGGGGCAGCAGCTGCTGTGGCACCCCCAGGTGGTGGGGCTGTACAATCGCGTGCTGCAGCGCTGCGAGATCAACACCACGACGCGCGAGGCGGGGGCCGGGGCGCTGCAGAACATCACCGCCGGGGAGAAGAGGtgggCATCTGTGCTCAGCAAGGTGGCTCTGGAGCAGGAGAGGATGCTGCCCGTGGTCCTGGACCTCCTGAGGACCAACAACGACCCGGAGCTGCGCTCTCTCACCGGCTTCATGAAGAACCTGTCCCGCCACGCCAAGAACAAGAACGACATGGCAACCAAGGTGGTGAACAACCTGATCAGCAAGCTGCCCACCGACGGGCACCAGAAGACGCCCTCCAGCGATGTGGTGGTGAACATCTGCGGTGTCCTTAACAACCTGGTGACCTGCAGCATCGTGGCCGCCCGAGACATCACCTTCTTCGACGGTCTGCAGAAACTGGTGGCCATCAAGAACTCCTTTGACAGCAACCCTGACGAGCAGAAGGCAGCGAAGGCCGCGTCCACCGTGCTGTCCAACATGTTCCAGTACAAGAAGCTGCACTCGGACTACAAGCAGAAAGGATTCACGAAGCACGACTTCACGGACAGCAGCTTTTAATCCCGACCTGCggcacctgtttttttttttttttgttagttttcttgttcattttttttatactaaAACTACTGAATTATTTCATCACCTGCTTTTACTCCGACTCTGACTGGCCTGCGGCGCGTTGTGGACTCAATGGACGACCCTCTCCCAGCCTCCTGAGGACGCGGTGCATTAACCctgtctgcccccccccccatctgtGTCATTCACcaagaaaatcaatcaatcaatcagtcaagaATCAGCGGCTGCCACAGCTGCCGAGAACCCCTACTTTACTGCTGTGTCTGTGGCCATGGATGCAAAGGATGGGGATGAGACGGAGGGCCGTGTCAGGGACTGTGAGACCATCCTTATGACAGAACTGTAAATAAAGATTTATAGAcgtcaccccccccccatctgAAGACCAATCATCTCTGATCCGACACCGGAAACCTGCCATGTGGGCCTCCTGGCAGCTCAGCGCTGTTTGCTGAACAGATAAGACCTGGACTCTGATCCCTCGGGGGCTCGGGGGCGGCGGCTCTGATTCAGGCGGAGGCCGATGTGTGCCGGTTCATGCCGctgatttgctttgtttgtatttttgaaagattGTATGTGAGGTTggatatagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtataatatatataggtaGATAGAGTTCAGCTTGGCTTATACAGACTGAGGGCTGTAAGCCTTGGGGGGGAAGATTCCTCTCTGTGCCAATAACCTGCGATTGTTCTGCGATCTCCTTTGGTGGACGATGAAAATCCGCTCTTGATAGTGAGATGTGGATCAGGCCGTATCCTGTCCCATTAACCCAGTTTGGCTAACTCCCCTCGCTGCAGAGTCGTTGAGCTGCTGCCGCTGGGTGTGGAAACTCAAAAAAGGAAAGATGGCTGTAATCGGAACTACAACTGCCTGCGGTGCCACCCTGTGGAGAAACAGTGTAACGACATCCTTTCAATAGacttttgatatatatatatatttgttttaattgcacagAAGATGTTTAAACGGTTCCATTGCAGGCAAACAATTAGACGTGCTGCTTTACTCACTGCTTAGGACTGTTCCTAGTGACACTATATCAGAGTCCGTTTGAAAAGATTGTGCCTCTTGAGAGAGCGTGCGATGGTGAAACGCTGGAGATCAGATCCCACTCTGGATTAAGGGCTCCCTGCTCTCTTTAGTGAGAGTGTGCCTTACCAGCCTCAGGGCTTCAAAATACCATGAAtcagaaaggaagaaaagataaatagtttaaatgagATTAAATGAGTTTTGGACTTGTCTCAGGATGGGAGGTGGGTTCTGGCTAGGTGGTCAGACCCAATAAACGCCGCACAGTGACCTCACGGGGTGTCAACCCATCCGCACCGTAGTCACGACACACTGGACACCGTGCACAGCCGGTACGAGATGATGGTGTCTTGCAATGGTTGTTACTGGGTTCATGCAAGACACAAAAAATGGAGACGAGAAATATCTGCCCTTGGAATGAATGTAGGGTCCGGTTATCTTGTCTTGTTTTTACGTTTATCGTCACTGTAGACACTTCACTACACACCCCTGCACTGGGACtggcctctcctctcctctcctgctgAAAACACTACTGATGCTCTACTTGTATAAACTTCTATTTTTATACGTATATAGTTTGtgccaaaatgttttgttgttttatttttttcttttaagggcAAATGTTTGTAAAATGGGTGTTAATTTTTGTATAGATTTAAGaatcctgttgtttttgtaggttaatgcaaatagaaaaacaaagagacaataaaatcataaataaatatatatataagaataagTATGAGGAATTCAGGCAATAGAGAAGTGATTGTTTCATAGGAGTTTCACTCTGATACGCTCTTGTGTGTGATTACACTTAAATTAGCATAAGTGCCAAGAAGACCTCGAGACCTCCTGTGGCTCCTGgttgatttgtgtgtttcttggcGTGAGTCTCAAACAGCAGCCTGGAGGGAAAGTCGTCGTTTAATATTGGACTGATAAATCGGAGGCAAGCAAACGTGTTGAATGAGATTTGGGGCTCTGGCGGGGGACCCTGGCGCTGTGGACAGCAGACGTCTGTCTCTGGACTGTCCTGCCCTGAGAGGAGCGTCTTCAAAATGCGAGCTGTGGCTTCAGGATGCGACTCATTCACGCTGTGTACTTCGCAAAGTAATGTCATTTAACTTAATGCTAATCAATGTGTGACTTTCTATTGCTCACTGTTTTCAACCGGGGGCTTCAGGCCATAACGGAGGGCAGACGTTGTTATGGGCTTCATGCAGGCAACTGGAGTCAATCTATAGCAAAATAGTTTGATGGGCTTGCTGTTCCCCAGTCCTGCCCAACACAGGGAGAGTCTTGCGCTACGACTGGTTGCTTAATTACACCATTggattttcaattaaacaattaattaacaagCTGGAATAATGTGGATTGCAAGGGGCCCGGTGGTGCCGACTGGGTTGTGCCGCCTGTAGGAGCCCATCGCAGGAGGCCCGCCCTGGTACCGCTCTCTTCCGTTTGTGGTGCCAGCTGAGCTCTGAATCGCAGGACTGGCACTCAGCCGACCCGACATCGCCGTCACTGGGCCTCGTTCTTGAGTTGTTCTACGCTGGCGGTGCATCAGTCAGCAATGGATTTCAGCTGACCTGCAGTGCTCGGCTGGGGCGGCGGCTGAAAACCACGTCCCCAcatctgtgtgtccctctgtcctgCTGTGTTGTTGTACAATATGGATGTAAcctttaacaataaataaacaattgtgtTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007205 True 5881 mRNA 0.56 16 7408648 7423202

Neighbor

gene id symbol gene type direction distance location
AMCG00007206 NA coding downstream 11847 7384420 ~ 7396801 (-)
AMCG00007202 NA coding downstream 84748 7319188 ~ 7323900 (-)
AMCG00007200 NA coding downstream 91426 7309756 ~ 7317222 (-)
AMCG00007199 LOC103364363,LOC106926867,LOC102197626,LOC100704341,LOC102233801,LOC101482485,LOC108430810,LOC103139413 coding downstream 101050 7283723 ~ 7307598 (-)
AMCG00007197 NA coding downstream 162661 7222351 ~ 7245987 (-)
AMCG00007207 NA coding upstream 5517 7428719 ~ 7429020 (-)
AMCG00007204 NA coding upstream 37123 7460325 ~ 7468151 (-)
AMCG00007211 NA coding upstream 137508 7560710 ~ 7561451 (-)
AMCG00007210 NA coding upstream 150100 7573302 ~ 7580896 (-)
AMCG00007214 NA coding upstream 161584 7584786 ~ 7591300 (-)
G21807 NA non-coding downstream 703986 6704409 ~ 6704662 (-)
G21803 NA non-coding downstream 719539 6687484 ~ 6689109 (-)
G21787 NA non-coding downstream 763770 6638997 ~ 6644878 (-)
G21786 NA non-coding downstream 770339 6635583 ~ 6638309 (-)
G21756 NA non-coding downstream 838909 6566217 ~ 6569739 (-)
G22057 NA non-coding upstream 330212 7753414 ~ 7753697 (-)
G22077 NA non-coding upstream 477600 7900802 ~ 7901175 (-)
G22111 NA non-coding upstream 490402 7913604 ~ 7984510 (-)
G22191 NA non-coding upstream 828825 8252027 ~ 8252664 (-)
G22193 NA non-coding upstream 830691 8253893 ~ 8254667 (-)
AMCG00007201 NA other downstream 66307 7324424 ~ 7342341 (-)
AMCG00007173 madd other downstream 1354584 6007640 ~ 6054064 (-)
G21632 psmc3,prs6a,LOC107758446 other downstream 1588364 5816809 ~ 5820284 (-)
G21429 NA other downstream 2351242 5056787 ~ 5057406 (-)
G21426 NA other downstream 2359128 5041659 ~ 5049520 (-)
G21942 NA other upstream 76245 7499447 ~ 7506875 (-)
G22200 NA other upstream 969994 8393196 ~ 8396224 (-)
AMCG00007267 NA other upstream 2034286 9457488 ~ 9463337 (-)
AMCG00007282 NA other upstream 2536860 9960062 ~ 10001165 (-)
AMCG00007299 NA other upstream 2729278 10152480 ~ 10246746 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location