G21286


Basic Information

Item Value
gene id G21286
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 4357713 ~ 4373125 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU26603
GGGGGGTATGTCTGTATTTCAGCTGTTTAATCCACACACAGGCTGAGACAAATCCACTGTATTACTGGTTAAAAAGCCCCACACACGTGCGTGCCACAGACTACAGTCATAGAACAGGATGGTAGCAAAGTTCATATTTGGAAAGCAAGGAAATATGAGGAAGTGGGATATGTAAAACAGTCATCATGGAAAGCCATAGTTCAGTTTACTATATACATGTATAGGcaaaacaatgaacacaaataCCGTACTCTGGAAATTCCCTagaagaatatttatttaaaagtatcaAAGCTATATTTTCATCACAAATTACATTGGTTTTGTGCTtttcaataatgaaaacagtatTTCACAAGATCATCAAGTTCTCAGGGCCTGAACGGATATAATTTCATAGTTACTACACATCACAACCCCAAGTGTATCATCTACTTAAACAGGACAGACGAGTACAGCAGGCACTGTGGGATTCCTCGTTTTCACACCCATACCAGACATTCACTGAAGTGAGGAGCAAAGAGTCTTGAACAGTTTGCACCATCAGATAACTGAGAATAAGAGACAAAATCAGTAGGAAAAGTacataatacacatttgtaacaataaaataaccttAAAAACCAATGGAAATAGTTAATAACAAACAGTACCCGTATAAAAATTGATTCCCTCTTCCTTGGATGATAACAGTATCTGCACAAAGACAGCAGTCAGGAGAGGCActctttaaaacacattttcataatagGTTGACGTTGAAATTATTAATCTCATCAAAACATGTTCTGACATCAAAGCAGCGATCAATGAGCAGAAAGATGTACCGTTGTGTTCAAAGGGCCTCGAGTGGCTTCGTGCCGGTGTGCGCGTTAGCAGAGCTGGGTTAGTGGCTCCCGATACTGCGTTAAAGTGAACGTGCAGGACTTGGGTCAGTTCTCCGAGATCACGAGGACACCTTCCAACACACTAGCGCGCCGGTCAGGACCCCGGCCGCGAAGATGGCCACGCTGTGCCACGAGAGGCTCTGGAACTGGGCCTGGACTGCTTCCTGCGACGGGAGAAGACAACAGCAGCGTCCATCAGGAACCCATGAAACCACTCTATTACTCTCAGAGTCAGCAAGACGTCACTGGGACCTTTACAATCATCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26603 True 1155 lncRNA 0.43 2 4357713 4373125

Neighbor

gene id symbol gene type direction distance location
AMCG00007114 NA coding downstream 2659 4352056 ~ 4355054 (-)
AMCG00007113 ano1,LOC108412580 coding downstream 34613 4285447 ~ 4323100 (-)
AMCG00007112 NA coding downstream 79485 4276343 ~ 4278228 (-)
AMCG00007107 NA coding downstream 95138 4262273 ~ 4262575 (-)
AMCG00007108 NA coding downstream 107559 4229918 ~ 4250154 (-)
AMCG00007119 LOC103379080 coding upstream 94547 4467672 ~ 4480405 (-)
AMCG00007121 NA coding upstream 269125 4642250 ~ 4658168 (-)
AMCG00007123 LOC101072525 coding upstream 288711 4661836 ~ 4671831 (-)
AMCG00007122 large2,gyltl1b,LOC107670096,LOC107670633,LOC107554994,LOC107602128 coding upstream 311130 4684255 ~ 4701314 (-)
AMCG00007130 NA coding upstream 511459 4884584 ~ 4893296 (-)
G21249 NA non-coding downstream 78144 4279316 ~ 4279569 (-)
G21122 NA non-coding downstream 854868 3501883 ~ 3502845 (-)
G21082 NA non-coding downstream 949005 3408154 ~ 3408708 (-)
G21036 NA non-coding downstream 1347458 3006398 ~ 3010255 (-)
G21034 NA non-coding downstream 1434686 2922660 ~ 2923027 (-)
G21367 dhcr7 non-coding upstream 307924 4681049 ~ 4710926 (-)
G21414 NA non-coding upstream 568946 4942071 ~ 4945720 (-)
G21418 NA non-coding upstream 586391 4959516 ~ 4959753 (-)
G21419 NA non-coding upstream 590232 4963357 ~ 4963560 (-)
G21423 NA non-coding upstream 654077 5027202 ~ 5027726 (-)
AMCG00007091 ckap5,LOC108269026 other downstream 857043 3476068 ~ 3500670 (-)
AMCG00007072 NA other downstream 1694064 2644905 ~ 2663649 (-)
AMCG00007059 NA other downstream 2160858 2142675 ~ 2196855 (-)
G20630 NA other downstream 3404651 952236 ~ 953062 (-)
G20609 NA other downstream 3439884 845929 ~ 917829 (-)
G21426 NA other upstream 668534 5041659 ~ 5049520 (-)
G21429 NA other upstream 683662 5056787 ~ 5057406 (-)
G21632 psmc3,prs6a,LOC107758446 other upstream 1443684 5816809 ~ 5820284 (-)
AMCG00007173 madd other upstream 1634515 6007640 ~ 6054064 (-)
AMCG00007201 NA other upstream 2951299 7324424 ~ 7342341 (-)

Expression


Co-expression Network