XLOC_006020 (asrgl1)


Basic Information

Item Value
gene id XLOC_006020
gene name asrgl1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 27768898 ~ 27782764 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011884
GCTCTCATGTTTTATGTCCTCGTGACGGAGAATCCAGGTTTATTTGCTAGTAACGCTAGAGCGTTTATTTTAGCTGTCTGCGGCTTTATATTTCTGTTAATAATCTGgtACTTTGGTGACAGATATGCTGCCGGTGGTGGTGGTGCATGGAGGTGCTGGTCATATTCCTAAAGAAAGAACTGAAGAATCTACAATTGGAGTGAAAGAGGCAGCCAGGACTGGATATGCCATCCTTCAGAGGGGCGGAAGTGCTGTTGATGCTGTAGTTGAAGCAGTGGCCCTGATGGAAACCAACCCAAGATTCAATGCAGGTCGAGGGTCAGTGTTAAATATTAAGGGGGAGGTAGAGATGGATGCATTGGTGATGGATGGCAGAACTCTTGACAGCGGGGCTGTTTCTGCCGTAAGAAGAATCGCTAACCCTGTGCAACTAGCCAGGCTTGTAATGGAGAAGACCAAACACTTGTGTCTGACAGCTGAAGGGGCTTCAAAGTTTGCCAGAAGCATGGGTGTACCGGAAGTGCCCGAGGAGTCATTGATCACAGACTATGCCAAGATGCGCTGGAAGAAGAACTTGGAGCCAGATGCCAACCCTGTGGAATGCCAAATGGGAAAGATGGGGACAGTAGGTGCAGTAGCCGTGGACATGGATGGAAACATTGCTTGTGCCACCTCCACTGGAGGAATGATAAATAAAATGGAGGGTCGTGTGGGAGACACACCGTGTGTTGGATGTGGGGGTTATGCTGATAACAAGATTGGTGCAGTTTCACCCACAGGCCACGGAGAAGCCATCATGAAGGTCACACTGTCTAGACTCGTTCTCTTCCACATGGAGCAAGGGAAGACCCCAGAGGAGGCGAGTGACCTGGCTCTTGCGTACATGAAGGAGCGTGTGGATGGTCTCGGCGGGGTGGTGGTGGTTGATCATAACGGCACATGGGCTGCTCGCTTCAGCAGTTTACAGATGTCATGGGCCGCTGCCCAGCAGGGCAAACTCCATTTTGGCCTGTTCCATGGTGACCACTTTACTGAGCCTGTTGAAGAGCACACATAATGAAACCACAAAAGTATACattttggtatcactttattttaatggttctttttaacacattttgttgattaTATGTTACTCTAATTCTCAAAATTGACATTTACTtgcaaatactgtttttttttttccaagtctgTTGTCAGCAACAATCAGCAACAGCCAATCTTAAGCAGATAGACTACTAATAATCCAATGAGAATGTAActtatagtcaattaaatgtcaaaataaagtgatacctacGTTTTTTTTTCAATCAGTATTGATTATTAAGGGAAAAATGTGTACATGCTAATCAGTGTTAtagatacataaatacatacatggcaggaattgtattaattatattgtgaaaaaaatgtgtatgtgtaaCAGTAAAAGAAGTCTTGCACAAACTGACTGACCATAtaaatataaaccaggcttaacactCCATTTGTTAGCAGTTTTGTCTGTCCTCTGTGGTACTGTTATGCTCtccactagatggagacaaattGTATTCTTTGGAAATCGTTTTAATCTAAGTGCAGTGCAcgtttaataaatgtatgattaaa
>TCONS_00011885
ttccaggtACTTTGGTGACAGATATGCTGCCGGTGGTGGTGGTGCATGGAGGTGCTGGTCATATTCCTAAAGAAAGAACTGAAGAATCTACAATTGGAGTGAAAGAGGCAGCCAGGACTGGATATGCCATCCTTCAGAGGGGCGGAAGTGCTGTTGATGCTGTAGTTGAAGCAGTGGCCCTGATGGAAACCAACCCAAGATTCAATGCAGGTCGAGGGTCAGTGTTAAATATTAAGGGGGAGGTAGAGATGGATGCATTGGTGATGGATGGCAGAACTCTTGACAGCGGGGCTGTTTCTGCCGTAAGAAGAATCGCTAACCCTGTGCAACTAGCCAGGCTTGTAATGGAGAAGACCAAACACTTGTGTCTGACAGCTGAAGGGGCTTCAAAGTTTGCCAGAAGCATGGGTGTACCGGAAGTGCCCGAGGAGTCATTGATCACAGACTATGCCAAGATGCGCTGGAAGAAGAACTTGGAGCCAGATGCCAACCCTGTGGAATGCCAAATGGGAAAGATGGGGACAGTAGGTGCAGTAGCCGTGGACATGGATGGAAACATTGCTTGTGCCACCTCCACTGGAGGAATGATAAATAAAATGGAGGGTCGTGTGGGAGACACACCGTGTGTTGGATGTGGGGGTTATGCTGATAACAAGATTGGTGCAGTTTCACCCACAGGCCACGGAGAAGCCATCATGAAGGTCACACTGTCTAGACTCGTTCTCTTCCACATGGAGCAAGGGAAGACCCCAGAGGAGGCGAGTGACCTGGCTCTTGCGTACATGAAGGAGCGTGTGGATGGTCTCGGCGGGGTGGTGGTGGTTGATCATAACGGCACATGGGCTGCTCGCTTCAGCAGTTTACAGATGTCATGGGCCGCTGCCCAGCAGGGCAAACTCCATTTTGGCCTGTTCCATGGTGACCACTTTACTGAGCCTGTTGAAGAGCACACATAA

Function

symbol description
asrgl1 Predicted to enable asparaginase activity and beta-aspartyl-peptidase activity. Predicted to be involved in asparagine catabolic process via L-aspartate. Predicted to act upstream of or within proteolysis. Predicted to be located in photoreceptor inner segment. Predicted to be active in cytoplasm. Orthologous to human ASRGL1 (asparaginase and isoaspartyl peptidase 1).

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0033345 asparagine catabolic process via L-aspartate biological_process
GO:0001917 photoreceptor inner segment cellular_component
GO:0005737 cytoplasm cellular_component
GO:0008798 beta-aspartyl-peptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0004067 asparaginase activity molecular_function

KEGG:

id description
ko00250 Alanine, aspartate and glutamate metabolism
ko00460 Cyanoamino acid metabolism
ko01002 Peptidases and inhibitors

ZFIN:

id description
ZDB-GENE-050320-102 Predicted to enable asparaginase activity and beta-aspartyl-peptidase activity. Predicted to be involved in asparagine catabolic process via L-aspartate. Predicted to act upstream of or within proteolysis. Predicted to be located in photoreceptor inner segment. Predicted to be active in cytoplasm. Orthologous to human ASRGL1 (asparaginase and isoaspartyl peptidase 1).

Ensembl:

ensembl_id ENSDARG00000021681

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011884 False 1617 mRNA 0.43 7 27768898 27782764
TCONS_00011885 True 956 mRNA 0.52 6 27770424 27782204

Neighbor

gene id symbol gene type direction distance location
XLOC_006019 CR354610.2 coding upstream 376961 27363949 ~ 27391937 (+)
XLOC_006018 cgas coding upstream 436538 27328098 ~ 27332360 (+)
XLOC_006017 eef1a1a coding upstream 443013 27314795 ~ 27325885 (+)
XLOC_006016 slc17a5 coding upstream 455342 27298673 ~ 27313556 (+)
XLOC_006015 rin2 coding upstream 471949 27232694 ~ 27296949 (+)
XLOC_006021 NA coding downstream 2330 27785094 ~ 27805880 (+)
XLOC_006022 dre-mir-30e-2 coding downstream 12366 27795130 ~ 27795209 (+)
XLOC_006023 b3gat2 coding downstream 168924 27951688 ~ 28009574 (+)
XLOC_006024 NA coding downstream 481472 28264236 ~ 28282323 (+)
XLOC_006025 CR762431.1 coding downstream 624149 28406913 ~ 28414559 (+)
XLOC_006014 BX323884.1 non-coding upstream 536325 27216641 ~ 27232573 (+)
XLOC_006011 NA non-coding upstream 959579 26802494 ~ 26809319 (+)
XLOC_006009 NA non-coding upstream 1703634 26056457 ~ 26065264 (+)
XLOC_006008 NA non-coding upstream 1785533 25965727 ~ 25983365 (+)
XLOC_006027 NA non-coding downstream 692837 28475601 ~ 28483406 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000012_10705713_10710443 ASRGL1 coding CI01000012 null 10705713 ~ 10710443 (-)