XLOC_006031 (wbp1la)


Basic Information

Item Value
gene id XLOC_006031
gene name wbp1la
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 28580357 ~ 28596765 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011899
GAGAgttgaaagaaagaagaaagagaCGCAATAGAAGCTAGCTCGCGGGCTAGCTTAATGTCCTACCGTGTTGCAAATGTGCCCAAAGCCACGGGAAAGGACGGAATGTGGGGGGTTGGATTCATAAAACTGGGCATGGGGTTGTTTGTAAGTAGCGCGGTTATTGGACCGGTGGGTTCGGTGTCCGTGGAGGCAGCGTTGACCGAGGGACGATTGATTTGTGTAGGAGTCAACAACCAGAGCTACTACTGTGATTCAGGCTACTGTTGTGATGAATCTCAGTGTTGCAGCTATTACTACGAGGTGTGGTGGTTTTGGTTGGTCCTGACACTTATCGTCATTCTGGGCTGCTGCTGTGTTTGTCATCACCGTAGAGCCAAACACAGACTGCAACAACAGCAGCGGCAGCACGAGATCAACCTCATCGCCTACAGAGAAGCCCATAACTACTCCTCTCTGCCCTTCTACTTCAGGTTTCTACCTGGCTACCTCTTACCAGCCTATGAGGAAGTAGAGAACAGACCTCCAACACCCCCTCCTCCATACAGTGCCTCTCAGCCGGGCCACTCCACCAGCTCTGACCCCTTGTGCTCCGAACAACCGGACGAGCTCTGCCCTCCACTGCAGTCCAGCCCCGTCACCCCGTCTGCATCCGAAAACCACTCTCCAGAGCCCTGCACAGAGCAGCCACAGACTCCCACCACACACCACCCTGCCAAACCACAGTACCTCAGCCTAGAGGAGGACGGGCGACTCCAGCAGGTGGCATGCGCGACCTCACACAGCCTGCTCAAACAGGACAGCTCGGGCGAAGACCTGAGCCAACCTGGAGACTGTTCTCCTGACAGCAAAGATAAGACTCCCGGTCGGCACCGGCGCTTCACTGGTGATTCCGGCATcgaggtgtgtgtgtgcaacCAGGGGCCTGGGGATGGggaggaagaagaggagatgAAAGAGCTTGTAGGGCATATGGATGCAAGGGGGCTGGAGGAGCAGGACTTCTGTGATAGTTGCAACCCTCGCAGCAGCAGCCCTCCTCGGGGCCCAGGGGACGTGGAGCAGGGTTTGGCTGATTCAGATGTGCCTCTGGAGCCTCAACGACCCCCGGTCTGCCTCCAACTGCACACCATCAGCGAACAGGATGGCCCGAATCACACCAGCAACACAGACCCCCCGAGTTGA

Function

symbol description
wbp1la Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human WBP1L (WW domain binding protein 1 like).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-1961 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human WBP1L (WW domain binding protein 1 like).

Ensembl:

ensembl_id ENSDARG00000013245

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011899 True 1185 mRNA 0.57 4 28580357 28596765

Neighbor

gene id symbol gene type direction distance location
XLOC_006029 fbxw4 coding upstream 4898 28512530 ~ 28575459 (+)
XLOC_006030 NA coding upstream 12871 28565179 ~ 28567486 (+)
XLOC_006028 fgf8a coding upstream 78372 28495419 ~ 28501985 (+)
XLOC_006027 NA coding upstream 96951 28475601 ~ 28483406 (+)
XLOC_006026 slc2a15a coding upstream 138271 28417297 ~ 28442086 (+)
XLOC_006032 borcs7 coding downstream 15548 28612313 ~ 28615893 (+)
XLOC_006033 cnnm2a coding downstream 21321 28618086 ~ 28643260 (+)
XLOC_006034 inaa coding downstream 78921 28675686 ~ 28681036 (+)
XLOC_006035 polr1c coding downstream 93590 28690355 ~ 28694924 (+)
XLOC_006036 si:ch211-67n3.9 coding downstream 104468 28701233 ~ 28774347 (+)
XLOC_006025 CR762431.1 non-coding upstream 165798 28406913 ~ 28414559 (+)
XLOC_006024 NA non-coding upstream 298034 28264236 ~ 28282323 (+)
XLOC_006021 NA non-coding upstream 774477 27785094 ~ 27805880 (+)
XLOC_006037 CU640488.1 non-coding downstream 143470 28740235 ~ 28740369 (+)
XLOC_006039 NA non-coding downstream 211327 28808092 ~ 28817882 (+)
XLOC_006042 NA non-coding downstream 318773 28915538 ~ 29097526 (+)
XLOC_006043 CU639469.2 non-coding downstream 328081 28924846 ~ 28924965 (+)
XLOC_006044 NA non-coding downstream 486322 29083087 ~ 29083291 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000012_10303346_10315263 WBP1LA coding CI01000012 null 10303163 ~ 10315900 (-)
bowfin (Amia calva) AMCG00003335 NA coding CM030139.1 CM030139.1 19829188 ~ 19847399 (-)