AMCG00009087


Basic Information

Item Value
gene id AMCG00009087
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 24858013 ~ 24859230 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009087
ATGGCCAGCACTCAGACAGGTCTGAAACCCCCTTTTAAAGAGGTGGCTTTACTCAAAGGAAACGTGAAGAGGCTGTGTAGGGAGAGGCTGGAGGACGCCCCTATTAAAAAAAGGGTAGTGGCTGAAATTAACCTGAAGCGGAGATCGCTCGAGGGAGTCCCCAAATCGCCCAAAGTCAAGAAGGAATACATAGAGGACTGCGGGGAAGGGGAGTCCAGCGAGGGTGAGAGAATCGGGAACCAGCTGCCTGTCCCCGGGGCCAAGGCTTTAGACCTCAGCCCAGGACTCAAGCACACTCTGGCCCAGTTCCACCTCAGCAGCCAGAGCTCCCTGGGTGGGCCCGCAGCGTTTTCAGCCCGAAACACCCAGGAGTCCTCCTCGCCAAACGTCTTTGTACCTCTTCCCTCCCCACCTGTGCTGCCGGGTCCTCTGCTCATCCCCTGCGACAGCTCCACAGAGCTCACCCACTCTCTTTTGGAGGGGGAGTCCATCTCTTGCTTCATGGTCGGTGGGGAGAAGCGGCTGTGTCTCCCCCAGGTCCTCAATTCAGTGCTGCGTGACTTCTCTCTGCAGCAGATCAACACAGTCTGTGACGAGCTCTACATCTACTGCTCCCGCTGCAATGCCGACCAGCTGCACATCCTCAAAGTGCTGGGCATCCTACCCTTCAATGCCCCCTCCTGCGGTCTGATTACCCTCACCGACGCCCAAAGACTATGCAATGCCCTGTTGCGCCCGGGCACTCTCCCCCAGGGCACCCCCTGCAAGCTGTCGGAAAAGGCCCAGCTCAAGGAGAGCGAAGCTGTCTTTGAGGTGGAACACGAGTGCTTGGGGAAGTGCCAGGGTCTTTTTGTACCCCACTTCTACACACAACCCGATGCCCCCTGCATCCAGTGTGGGGAGTGCCAGCTTATGTTCTCCCCCCAGAAATTCGTCATGCACTCCCACAAGTCCCCCGATAAGAGGACCTGCCATTGGGGCTTTGACTCTGCCAAGTGGCCCTGCTACCTGCAGCTGGGTCGGAAGTACTTTGAGAAGCCTGAGGAGATCGGGCTCAAGAGGCTCCTAGAGGAGATGAAGGAGAAGTTCCACTTCCAGCAGAAAAGGCCACTGGAAAAAGTAAGTAGCACTCACCTGTACCCTGCTGTTGGTGTATTGGCTCTTTTGGATTTGTTGGTCTGTTCTGCTGACCCACTGGTATATCTCGCCCTGTTGTGA

Function

GO: NA

KEGG:

id description
K18499 SKIL; Ski-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009087 True 1218 mRNA 0.57 1 24858013 24859230

Neighbor

gene id symbol gene type direction distance location
AMCG00009084 prkci,LOC106600503 coding upstream 13796 24818218 ~ 24844217 (+)
AMCG00009081 LOC108442332,LOC107680258,LOC107732514,LOC107550597,LOC107688500,LOC107584921,LOC107722625 coding upstream 77262 24762016 ~ 24780751 (+)
AMCG00009080 rpl22l1,rl22l,LOC107721850 coding upstream 191785 24664303 ~ 24666228 (+)
AMCG00009077 eif5a,LOC107590245,LOC107685442,LOC107586748 coding upstream 203728 24649714 ~ 24654285 (+)
AMCG00009078 NA coding upstream 210533 24634390 ~ 24647480 (+)
AMCG00009083 NA coding downstream 14343 24873573 ~ 24881942 (+)
AMCG00009089 NA coding downstream 91545 24950775 ~ 24958636 (+)
AMCG00009097 NA coding downstream 172872 25032102 ~ 25037678 (+)
AMCG00009096 NA coding downstream 292568 25151798 ~ 25157551 (+)
AMCG00009107 NA coding downstream 712098 25571328 ~ 25574564 (+)
G54430 NA non-coding upstream 70928 24783510 ~ 24787085 (+)
G54356 NA non-coding upstream 579452 24277905 ~ 24278561 (+)
G54328 NA non-coding upstream 691952 24165790 ~ 24166061 (+)
G54264 NA non-coding upstream 963726 23890127 ~ 23894287 (+)
G54238 NA non-coding upstream 1193361 23664157 ~ 23664652 (+)
G54547 NA non-coding downstream 312771 25172001 ~ 25172864 (+)
G54563 NA non-coding downstream 449030 25308260 ~ 25308495 (+)
G54566 NA non-coding downstream 488048 25347278 ~ 25348983 (+)
G54580 NA non-coding downstream 545440 25404670 ~ 25413822 (+)
G54608 NA non-coding downstream 657143 25516373 ~ 25517909 (+)
AMCG00009085 NA other upstream 41479 24812618 ~ 24816534 (+)
G54263 NA other upstream 882107 23883317 ~ 23975906 (+)
G53917 NA other upstream 3564112 21292241 ~ 21293901 (+)
G53915 NA other upstream 3582659 21274611 ~ 21275354 (+)
G53911 NA other upstream 3689438 21168231 ~ 21168575 (+)
AMCG00009088 LOC104966806,LOC108444346 other downstream 38886 24898116 ~ 24917863 (+)
AMCG00009104 NA other downstream 630481 25489711 ~ 25493573 (+)
AMCG00009108 NA other downstream 725652 25584882 ~ 25587615 (+)
AMCG00009129 NA other downstream 1934307 26793537 ~ 26796768 (+)
AMCG00009164 NA other downstream 2754353 27613583 ~ 27626011 (+)

Expression


Co-expression Network