AMCG00009081 (LOC108442332,LOC107680258,LOC107732514,LOC107550597,LOC107688500,LOC107584921,LOC107722625)


Basic Information

Item Value
gene id AMCG00009081
gene name LOC108442332,LOC107680258,LOC107732514,LOC107550597,LOC107688500,LOC107584921,LOC107722625
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 24762016 ~ 24780751 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009081
agaaaccAGTCATTTAAGAGAAGTCTGACCCATTGCACCATGTGGATCAAAGCCGATATGGACCTGCTGTGAAAACTGAGACAGTGACACAGCtcttttttattgattgttgtTGCTGTCATTCGCCTCAACCATCACAAAATCACAGCCTTTTGGGAGAGGGTGTTTTTTTGTAGTTTCTTTACGTCAGCGCTGAGAAACCCACTGTGCATTAGTTTGTCTCTCTCCCGCCCACCCTCCGTTTCGCTGCAGCTGACCCCCTGTATATTTCCTGTGATTCGAGTTGAAAATGAGCGGAGCTTTTGCCAAGCTGGACCCCAGGAGGATCCAATGGGGCGCCACTTGGTATGCCTTCCACTCCCGGATCCTGAGGACCAAGCCCGTGGAGTCCATGCTGGATGGCGCGGGCCCCACTGGCGCCCACAGTACCAAGTTGGCACGAGTGCTGACCACTGTGGATCTGGTGTCTCTGGGTGTGGGCAGCTGTGTGGGCACAGGAATGTACGTGGTGTCTGGACTGGTGGCTAAGGAAATGGCTGGACCTGGAGTCATTGTGTCCTTCATCATTGCTGCGGTGGCTTCCATTCTGTCAGGAGTGTGCTACGCAGAGTTTGGCGTCCGTGTACCAAAGACCACAGGGTCGGCCTACACCTACAGTTACGTCACTGTCGGGGAGTTTGTGGCGTTCTTCATTGGCTGGAACCTCATCCTGGAGTACCTGATTGGCACAGCTGCTGGGGCCAGTGCTCTGAGCAGTATGTTCGACTCACTGGCCAATCACACAATCAGTCGCTTCATGATCCATAACATCGGCACTCTGAATGGCCTGGGCAAAGGGGAGGAGTCATACCCCGACCTCCTGGCCCTAGTCATTGCCATCCTGGTGACGGTGATCGTGGCCCTGGGAGTGAAGAACTCAGTGGGCTTCAACAACATCCTCAATGTCATCAACCTGGTGGTGTGGGTGTTCATGATGATTGCTGGGCTTTTCTTCGTCAGTGGCAGCAACTGGGATGATGGTCGGTTCCTGCCCTTTGGCTGGTCAGGGGTTCTGCAGGGGGCGGCCACCTGTTTCTACGCGTTCATTGGGTTTGACATCATCGCCACCACAGGAGAGGAGGCCAAGAGTCCCAACACCTCCATCCCCTACGCCATCACAGCATCTCTTGTCACCTGCCTCACGGCCTACGTCTCTGTGAGTGTGATTCTGACCCTGATGGTGCCTTACAATGACATCGACGCGGAGTCCCCCCTCATGGAAATGTTTGTGCTCCACGGCTTCCAGGCTGCCAAATACATCGTGGCCATTGGCTCCATCGCCGGGCTCACAGTCAGTCTGCTGGGCTCTCTGTTCCCCATGCCCAGGGTCATCTATGCCATGGCAGGAGATGGACTGCTCTTTAGGTTCCTCGCTCATGTCAGCACCTACACAGAGACACCTGCGGTGGCTTGTGTGGTGTCCGGCTTCCTGGCAGCTCTGCTGGCTCTCCTTGTCAGCCTGCGAGACCTGATCGAGATGATGTCCATCGGCACTCTCCTGGCCTACACTCTGGTGTCggtgtgtgtgctgctgctgcgcTACCAGCCAGAGAGCGACATTGACGGCTTTGTCAAGTTCCTTTCAGAGGAGCACACCAAGAAGAAGGAAGGGATCCTGGCTGAGTGTGAGAAGGAGGTGTGCTCGCCCATTAGTGAGGGCGAGGAGTACGGCGGGCCGCCCACCAACACCTGTGGGGCGAAGAACCTGCCCTCGCTGGGTGACAACGAGATGCTGATCGGCAAATCTGACAAGTCCACTTATACTGCCAACCACCCCAACTACGGCACAGTGGACATGACTTCTGGAATAGAGGCCGACGAATCTGAGAACATCTATCTCATCAAACTCAAGAAACTCATCGGCCCCCGCTACTACACGCTGAGGATCCGCCTGGGCCTGCCGAGCAAAATGGACCGCCCCACTGTCGCCACGGGCCGCACCGTCACCACCTGTGTCCTGCTGCTCTTCATCCTCATCTTCATCTTCTGCTCCTTCATCATCTTCGGCGCAGACTACATCTCCGACCACAGCTGGTGGGCTATGCTCCTGGTGGTCCTAATGGTCCTCCTCATCTGTGCACTGGTCTTCGTCATCCTCCAGCAGCCCGAGAACCCCAAGAAGCTCCCCTACATGGCTCCCTGTGTACCCTTTGTGCCAGCCTTCGCTATGCTCGTCAACATTTACCTCATGCTCAAGCTCTCCAGCATCACCTGGATCCGGTTCGCAGTCTGGTGCTTTGTGGGCGTGCTGATATACTTTGGCTACGGCATGTGGAACAGCACCCTGGAAATCAACGCCCGAGAGGAGATCTTACACCAGAGCACGTACCAGCGCTACGACATGGATGTGGACGACACCTTCACAGTGGACGATGACATTCCCTACCCTCAGGAGGGTGGAGAGCAGTACCAGGACTGGGCCGCCCCCAAGGACAGGAGTTACCAGCACCAGCAGAAGGCCGTGCCTGATGCTGTAGACAACAACAGGACCTCGCAATGCAGTAAACCCAAAAGCAAAGGGAAGTCCAGTAAAGGCTTTGAGGCATTGATCGCGGACGATGAGCTAGATTACTCACCTGAATGAGAATGTATCTGAATGTCTGTGTCCCCCCTTGGGCTAGAATGTTAAacttgcaatttatttattttaaaaattgtattctatcttctatttgtatttggttttattcatcTCAGTTAGGGCTTTGTATGTTGGgttatttttgttggtttgttttgtttaattgcttgtttgtgtttgaacaGGCCTCCTCTTTTGTCccttcctggaaaaaaaaaaccatttgaaattacattaaatccactgcattgattttaaaatctgtaacgGTAGATATTAAAAGTCTAAACTGAAAGTGTAAAGAGAATCGGGTAAATAACTTGTACTTTTATCAAAACGTTTGCCATTGCATTTTCTAGcgaacacacacaatcacacatacaatattgtgtttctttccTTAATGTTTGGTGGAGTCCCAGATAAACTCCTGTGCGTTGAAAGATTAATTGCCAAGGAGATCTTCTGGGATTTGCCTAAAACGTCTTCACAATTCATCATATTTACATACCTCTTAATATGGCTCAGTAGTATTGGGACACCTCTGAATCAGGAGTATATAGATAATGTTCAGACCCTTAAGCTAATGCACACCTTATTTGTTTCTCTGCATGAAAAGTGTGTTGTGGGAAAGAAATATGGCAACTCACAAACTGCAGAGTTATATTatcaacaaatatataataatacaacagtTAAACAGTGGAGGCAAATACACCACAACATACTGATATTTAGATTTAGCAAATGAGGTGCAGGAACATTATACACTTGAACAGCAAATATGATTCTGATTTTAAAGAGCCATATTGGGAGGTATGCGTTATATTCCAAacccaacaaaacacaaatatttgcattaaacCTATAACAACAGGAAGGTACACTTTATCTAAGAGACAAGAGAGCCCCTAACGGAGGCCTGCAAGAAACActaatttgctgtattttttcaaaGTTCCCTACATTCTTAAAATACTGAAACCTGAAGTGATCTGATTGCACAGAACATAGTCTTGCTCTGCAGTCAGGCTCCCAACTATTAAACCAACACATCACAATGTGACACATatgtataatttcaaaattTCTGAATCTCATTTTCACTGGTACTGGTCCTAGGTTCTGACGTGTTCCTGTGCTTCTCAGCAGACTTAAACAGGTATGACATTGCTAGGAATCTTAATTGCTGAGAGAGGTGTGATCAGCTGTAGAGTTCCACGGGTTTCAGTGATTCACAGGGGGAATCATCCATGTCCCTGTGACAGAGATTGGCAAGATACTCTCACATTGTGGAGGTGCTGATAGAGCAATCAAAGAGAAGGAGCTGGTAGAAAACTGTTCATCTGTGTGAGGTGAGCAGTACTGAGGGGGAGAGCGAAAATTGTCTGATCCCAGTTTTAAACTGGTGTTCTTTTCTACAGATTTTATCATTGCTTGTAGAGCATTATGCATATGAAATATGGAGCAAGAACCCTTTGTGATGTTAAACACTTTTCTTggtgtgaaatacatttatttatttatttgtttatttacataaatacatatcagcccatcttttaaaatcagttCTGTCAGACAGTTCCAGggtcttttttcccccactatcAGTAGATTCAGAAAGATTTTGTTGAGCCATCTGACTTCCAGTGTTTCACTGTTGCACATTGTATAAGAGGCTTttgaaacatgtaaaatgtggGGAAGTTGAgatctatgtattatttattttgttggcaCTTTGTGCTACTTGAGAAAGACCCTGCGTGTTTCTTTTCCCACACAACGCAAGAGAAGTTTAAATTTCAAGGCTTCTGCTTTGATTCCGCCTGCCTTTATGTGACATCTAGCCCAAGGGCAttgtaaatgtgaaaacaaatggtAATTGGACTTTGCTTGCAATAGTGCCTTCATCTGTCAATGTGTGCTTTAACTTTTTCCCCCAGTAACCATTATAAATTTCTACTACTCTGTCAGGGGGAAGGGCAGGGGCATCTTTCAGGTGTTATTTTTCTACTGTTGTCTGTTTTCTTGATGCAGTTGTCAGTTATGTGGTACCTCACTTCTCTAGTTCTTCATGTGTTACAGTGAATCAGTCACACCATTGCAAGCAGGAAATTCCATGTATATACTCAACCCCACTGTTTAGCTTGTTAATGTTTCCtcatagagaaaaaaaaagaagaaaaaaagagacaaacCGAACTAAATGAAAGCATGAATGGGAATTCTTTGCTTGCGCTGAATGCTTTGTGGAGTGTAATGTCCTGATGTTCTTTCATCACAGTGGCTCAGGTGTTTTCTATCAGTTTCACCACTCACGACTCTCACATCCTGTATGGTTCAGTGCAAGACCAATTGAGGCCCTAAATTGACCTGCAAAAGTAACTCAACTGTGTCCCATTAATGGAAGCCTTAAGGGTATGGGATCTGTGAAGTGcagtacattcattatttatggatgcatttctttatgctttttaaattatacagtttaattGGTGACATTCTTGTTGTTATAGCTGCACCTCCTCGTGTATGCTTAGTattgaaatcattttaatgcatttccactgcctatttatttatccattagttgttttgtttattttagcttCTTGTCCTGAAACCAGCCATCTTTGTGAcgtttatgaaaataaaatacaaacaaatgacatGCATGACTGTATCCGTGATAGTCTGAATAAAATAGGCAAATATCAAAATCTCATTCTTGTTAGCTTGAATGGAAAAGGCAGTAGACATCTTGTACTGAATAGGAGAATAGTGAGAAGGGTCGCCCATAGGGTTTTGTCATTTAACCTCATTGTGTTCGTACTTATGCCTTTTTATGCCTTAGTTGTATTCCCATCTACAGTCTAAGACACTTCAGTCTAGTTCCACTTTTAAAAAGAGAGATATAGGGCCTCAATTGGAAGATGCATTTCAGCCTGGCATTTTATTATAGCAGCATGTTCAGAAATCCAGAACCCAGAGTGGAGTATCTTCCTTAAGTCTTTGCATGTCTGGCTACCACAcaagatgttttaaatgtaacaatgtagCAAAATTCGGGCTTCCTGAAAGAGTTCGGAGCCCCTATtgcgtttttttctttttttttttctgtttacaaGTCAAGCCAAAGTTTGCAAAGTTTTTGTTTACTTACTTGAACTAGCCAACCATTTAGATTCCACTAGAATGACAGtatggacacacacacgcacacgcacacacacacacacacacacacacacacataaagaaagttaatgaagtatttttttacagGTGTTTCATAACCATGGAGATGCTGCGTTCTCAGTAGGGTTGACGTTTTTTGTCAGGTGTGAGTGAGTAATTCCCAAAGATTCACTCAGTCTGCACACACAGACCTCTGAGACTGACTTCTGCAAAGcagtgagaaaaaataaataaatatatttttaatggtctTTCTAGAATTATAAGGCTCAgttaatgactttttttttcttcttctttgaaattacaaaacataggtctagaaaaatatatgaaattaatGTACAACTCGATAAGTAAACTTGTAAAAGTGTAAAgactattttattacaaatctttaaaaaagtaaaaacaaatgttgccaCTATTGCTTTTAAAGTCAGCTACTATTTGTTAAAATGGAGAAACATATCACGTTTGACTTGTTAAACTGTATTTCTGACATTCTGGTTTATTTGGTCTTTGTTTGGAAAATGTTGAGTGGCTAATTTTTGCTTAATATTTTGGGGTTTCTGCTGTATATTTTGCAAATTCTGGTATGGAGTTGCTGtattatggtttgtttgttattttctgtgtgtggtTTTTGCCCCTTGGTGGTACACTGTATAATGAGATATTGATATTGCCTCATGCAACAATGAAAGTTATTTATTGCAATTCTATTATAGAGTGACTCTtattttactgttgttgttttgatgcTACAAGTATATATCATGACTAAagac

Function

NR:

description
PREDICTED: probable cationic amino acid transporter

GO: NA

KEGG:

id description
K13871 SLC7A14; solute carrier family 7 (cationic amino acid transporter), member 14

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009081 True 6621 mRNA 0.44 7 24762016 24780751

Neighbor

gene id symbol gene type direction distance location
AMCG00009080 rpl22l1,rl22l,LOC107721850 coding upstream 95788 24664303 ~ 24666228 (+)
AMCG00009077 eif5a,LOC107590245,LOC107685442,LOC107586748 coding upstream 107731 24649714 ~ 24654285 (+)
AMCG00009078 NA coding upstream 114536 24634390 ~ 24647480 (+)
AMCG00009076 tnik,LOC103024681,LOC107721871,LOC107663657 coding upstream 130384 24566439 ~ 24631632 (+)
AMCG00009079 NA coding upstream 263527 24461938 ~ 24498489 (+)
AMCG00009084 prkci,LOC106600503 coding downstream 37467 24818218 ~ 24844217 (+)
AMCG00009087 NA coding downstream 77262 24858013 ~ 24859230 (+)
AMCG00009083 NA coding downstream 92822 24873573 ~ 24881942 (+)
AMCG00009089 NA coding downstream 170024 24950775 ~ 24958636 (+)
AMCG00009097 NA coding downstream 251351 25032102 ~ 25037678 (+)
G54356 NA non-coding upstream 483455 24277905 ~ 24278561 (+)
G54328 NA non-coding upstream 595955 24165790 ~ 24166061 (+)
G54264 NA non-coding upstream 867729 23890127 ~ 23894287 (+)
G54238 NA non-coding upstream 1097364 23664157 ~ 23664652 (+)
G54237 NA non-coding upstream 1097922 23663393 ~ 23664094 (+)
G54430 NA non-coding downstream 2759 24783510 ~ 24787085 (+)
G54547 NA non-coding downstream 391250 25172001 ~ 25172864 (+)
G54563 NA non-coding downstream 527509 25308260 ~ 25308495 (+)
G54566 NA non-coding downstream 566527 25347278 ~ 25348983 (+)
G54580 NA non-coding downstream 623919 25404670 ~ 25413822 (+)
G54263 NA other upstream 786110 23883317 ~ 23975906 (+)
G53917 NA other upstream 3468115 21292241 ~ 21293901 (+)
G53915 NA other upstream 3486662 21274611 ~ 21275354 (+)
G53911 NA other upstream 3593441 21168231 ~ 21168575 (+)
AMCG00009033 nlgn1,LOC103399994,LOC102210587,LOC102311540 other upstream 4365660 20376795 ~ 20396356 (+)
AMCG00009085 NA other downstream 31867 24812618 ~ 24816534 (+)
AMCG00009088 LOC104966806,LOC108444346 other downstream 117365 24898116 ~ 24917863 (+)
AMCG00009104 NA other downstream 708960 25489711 ~ 25493573 (+)
AMCG00009108 NA other downstream 804131 25584882 ~ 25587615 (+)
AMCG00009129 NA other downstream 2012786 26793537 ~ 26796768 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015467 slc7a14a coding NC_007113.7 CM002886.2 25860344 ~ 25990784 (+)