G54563


Basic Information

Item Value
gene id G54563
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 25308260 ~ 25308495 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU68209
gaacttcgtcgcagagaggcctctctggcttcggactcagataacagcacacagaacgaggtccgtgtggtgtggaacaaaggcagtccggttcggctttgtccaagaacttccactcagtcgatgcacctggaagttggggtttcgcaaaacagagtcttttccaaacagattttccactggtttgaaggctccaaggttgtgcacaaaatcttctttgcaagcagggtttccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68209 True 236 lncRNA 0.50 1 25308260 25308495

Neighbor

gene id symbol gene type direction distance location
AMCG00009096 NA coding upstream 150709 25151798 ~ 25157551 (+)
AMCG00009097 NA coding upstream 270582 25032102 ~ 25037678 (+)
AMCG00009089 NA coding upstream 349624 24950775 ~ 24958636 (+)
AMCG00009083 NA coding upstream 426318 24873573 ~ 24881942 (+)
AMCG00009087 NA coding upstream 449030 24858013 ~ 24859230 (+)
AMCG00009107 NA coding downstream 262833 25571328 ~ 25574564 (+)
AMCG00009111 LOC108428906,LOC107694655,LOC106600124,LOC107384117 coding downstream 315302 25623797 ~ 25639855 (+)
AMCG00009109 epha4b,LOC105890571,LOC108428906 coding downstream 359025 25667520 ~ 25674012 (+)
AMCG00009110 LOC103372263,LOC106600124,LOC108428906,LOC108239506,LOC102295545,LOC101472694,LOC103395911 coding downstream 384991 25693486 ~ 25716048 (+)
AMCG00009117 acvr1l,LOC107678695,LOC107602619,LOC108428902,LOC107749086 coding downstream 1189357 26497852 ~ 26509639 (+)
G54547 NA non-coding upstream 135396 25172001 ~ 25172864 (+)
G54430 NA non-coding upstream 521175 24783510 ~ 24787085 (+)
G54356 NA non-coding upstream 1029699 24277905 ~ 24278561 (+)
G54328 NA non-coding upstream 1142199 24165790 ~ 24166061 (+)
G54264 NA non-coding upstream 1413973 23890127 ~ 23894287 (+)
G54566 NA non-coding downstream 38783 25347278 ~ 25348983 (+)
G54580 NA non-coding downstream 96175 25404670 ~ 25413822 (+)
G54608 NA non-coding downstream 207878 25516373 ~ 25517909 (+)
G54609 NA non-coding downstream 212524 25521019 ~ 25521314 (+)
G54705 NA non-coding downstream 1099042 26407537 ~ 26407814 (+)
AMCG00009088 LOC104966806,LOC108444346 other upstream 390397 24898116 ~ 24917863 (+)
AMCG00009085 NA other upstream 491726 24812618 ~ 24816534 (+)
G54263 NA other upstream 1332354 23883317 ~ 23975906 (+)
G53917 NA other upstream 4014359 21292241 ~ 21293901 (+)
G53915 NA other upstream 4032906 21274611 ~ 21275354 (+)
AMCG00009104 NA other downstream 181216 25489711 ~ 25493573 (+)
AMCG00009108 NA other downstream 276387 25584882 ~ 25587615 (+)
AMCG00009129 NA other downstream 1485042 26793537 ~ 26796768 (+)
AMCG00009164 NA other downstream 2305088 27613583 ~ 27626011 (+)
AMCG00009204 NA other downstream 3457959 28766454 ~ 28799600 (+)

Expression


Co-expression Network