Gene
RNA
| Item | Value |
|---|---|
| gene id | G53812 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 20290778 ~ 20317034 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU67296 | False | 311 | lncRNA | 0.33 | 2 | 20290778 | 20316786 |
| TU67297 | True | 572 | lncRNA | 0.32 | 2 | 20290778 | 20317034 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009032 | NA | coding | upstream | 26912 | 20263075 ~ 20263866 (+) |
| AMCG00009025 | atp11b | coding | upstream | 341343 | 19939076 ~ 19949435 (+) |
| AMCG00009026 | LOC107550661,LOC107566880 | coding | upstream | 374872 | 19861278 ~ 19915906 (+) |
| AMCG00009016 | rfc4,LOC103355474 | coding | upstream | 1916510 | 18361526 ~ 18374268 (+) |
| AMCG00009014 | NA | coding | upstream | 2070525 | 18219072 ~ 18220253 (+) |
| AMCG00009034 | nlgn1 | coding | downstream | 139423 | 20456457 ~ 20461014 (+) |
| AMCG00009035 | nlgn1,LOC106584306 | coding | downstream | 369111 | 20686145 ~ 20692387 (+) |
| AMCG00009038 | NA | coding | downstream | 680864 | 20997898 ~ 21087025 (+) |
| AMCG00009042 | NA | coding | downstream | 2113306 | 22430340 ~ 22441467 (+) |
| AMCG00009043 | NA | coding | downstream | 2296318 | 22613352 ~ 22631352 (+) |
| G53803 | NA | non-coding | upstream | 18964 | 20263496 ~ 20271814 (+) |
| G53793 | LOC107745311 | non-coding | upstream | 77976 | 20136632 ~ 20212802 (+) |
| G53791 | NA | non-coding | upstream | 186778 | 20103780 ~ 20104000 (+) |
| G53764 | NA | non-coding | upstream | 260347 | 20030156 ~ 20030431 (+) |
| G53762 | NA | non-coding | upstream | 260774 | 20029294 ~ 20030004 (+) |
| G53834 | NA | non-coding | downstream | 132695 | 20449729 ~ 20544953 (+) |
| G53855 | NA | non-coding | downstream | 314414 | 20631448 ~ 20724272 (+) |
| G53877 | NA | non-coding | downstream | 417321 | 20734355 ~ 20734623 (+) |
| G53878 | NA | non-coding | downstream | 442635 | 20759669 ~ 20759870 (+) |
| G53882 | NA | non-coding | downstream | 588019 | 20905053 ~ 20905348 (+) |
| AMCG00009022 | dnajc19,LOC107727073 | other | upstream | 743271 | 19527897 ~ 19547507 (+) |
| G53520 | NA | other | upstream | 1736818 | 18550772 ~ 18553960 (+) |
| AMCG00009009 | NA | other | upstream | 2370186 | 17917548 ~ 17920592 (+) |
| G53298 | mybpc2 | other | upstream | 2560118 | 17729366 ~ 17730660 (+) |
| AMCG00008995 | NA | other | upstream | 2947102 | 17330892 ~ 17343676 (+) |
| AMCG00009033 | nlgn1,LOC103399994,LOC102210587,LOC102311540 | other | downstream | 59761 | 20376795 ~ 20396356 (+) |
| G53911 | NA | other | downstream | 851197 | 21168231 ~ 21168575 (+) |
| G53915 | NA | other | downstream | 957577 | 21274611 ~ 21275354 (+) |
| G53917 | NA | other | downstream | 975207 | 21292241 ~ 21293901 (+) |
| G54263 | NA | other | downstream | 3566283 | 23883317 ~ 23975906 (+) |
