Gene
RNA
| Item | Value |
|---|---|
| gene id | G56120 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 32548007 ~ 32553904 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04142 | Lysosome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU70149 | True | 654 | lncRNA | 0.53 | 2 | 32548007 | 32553904 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009304 | NA | coding | upstream | 14600 | 32521518 ~ 32533407 (+) |
| AMCG00009298 | NA | coding | upstream | 351654 | 32183125 ~ 32196353 (+) |
| AMCG00009293 | NA | coding | upstream | 428811 | 32115478 ~ 32119196 (+) |
| AMCG00009289 | NA | coding | upstream | 481308 | 32060813 ~ 32066699 (+) |
| AMCG00009291 | NA | coding | upstream | 495614 | 32050504 ~ 32052393 (+) |
| AMCG00009308 | NA | coding | downstream | 19035 | 32572939 ~ 32752465 (+) |
| AMCG00009311 | NA | coding | downstream | 205629 | 32759533 ~ 32760129 (+) |
| AMCG00009309 | LOC106612913,LOC106580942,LOC103369651,LOC102193686 | coding | downstream | 229227 | 32783131 ~ 32800441 (+) |
| AMCG00009312 | NA | coding | downstream | 293646 | 32847550 ~ 32847873 (+) |
| AMCG00009313 | LOC107702994 | coding | downstream | 354030 | 32907934 ~ 32923438 (+) |
| G56064 | cul3,LOC100710156,LOC107384027 | non-coding | upstream | 368748 | 32174307 ~ 32179259 (+) |
| G56062 | NA | non-coding | upstream | 379959 | 32166865 ~ 32168048 (+) |
| G56021 | NA | non-coding | upstream | 490525 | 32053787 ~ 32057482 (+) |
| G55929 | NA | non-coding | upstream | 995845 | 31548531 ~ 31552162 (+) |
| G55926 | NA | non-coding | upstream | 1000775 | 31542621 ~ 31547232 (+) |
| G56211 | ppm1l,LOC108430727,LOC105935930 | non-coding | downstream | 394233 | 32948137 ~ 32950966 (+) |
| G56261 | NA | non-coding | downstream | 552466 | 33106370 ~ 33106621 (+) |
| G56262 | NA | non-coding | downstream | 555835 | 33109739 ~ 33110019 (+) |
| G56268 | NA | non-coding | downstream | 727633 | 33281537 ~ 33281764 (+) |
| G56282 | NA | non-coding | downstream | 902987 | 33456891 ~ 33457172 (+) |
| G56060 | NA | other | upstream | 382642 | 32161760 ~ 32165365 (+) |
| G55591 | NA | other | upstream | 2552569 | 29995126 ~ 29995438 (+) |
| G55573 | NA | other | upstream | 2636443 | 29907911 ~ 29911564 (+) |
| AMCG00009220 | lsm2,LSM2,smx5 | other | upstream | 3373276 | 29171323 ~ 29174731 (+) |
| AMCG00009208 | NA | other | upstream | 3439780 | 29103608 ~ 29108227 (+) |
| G56368 | NA | other | downstream | 1446892 | 34000796 ~ 34031445 (+) |
| G56369 | NA | other | downstream | 1461766 | 34015670 ~ 34018815 (+) |
| AMCG00009345 | NA | other | downstream | 1809515 | 34363419 ~ 34369257 (+) |
| G56536 | LOC100846954 | other | downstream | 2835010 | 35388914 ~ 35389327 (+) |
| AMCG00009404 | NA | other | downstream | 4739999 | 37293903 ~ 37297009 (+) |
