G58876


Basic Information

Item Value
gene id G58876
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45512636 ~ 45513047 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU73604
cgggcctgcacgtgctttcttgagcagggggaccttgcgggcgctacaggatttcagtccttcacggcgtagtgcgttaccaattgacatccttggacagctctttggtcttggccatggtggagagtttggaatctgattgattgattgcttctgtggacggttgtcttttatacaggtaacgagctgagattaggagctctccctttaagagag

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU73604 True 216 lncRNA 0.51 2 45512636 45513047

Neighbor

gene id symbol gene type direction distance location
AMCG00009750 NA coding upstream 35639 45466659 ~ 45476997 (+)
AMCG00009752 NA coding upstream 58657 45437969 ~ 45453979 (+)
AMCG00009751 NA coding upstream 76771 45422527 ~ 45435865 (+)
AMCG00009753 NA coding upstream 116613 45390752 ~ 45396023 (+)
AMCG00009743 NA coding upstream 122923 45376438 ~ 45389713 (+)
AMCG00009757 NA coding downstream 8306 45521353 ~ 45531436 (+)
AMCG00009763 plxnb3,LOC101165957,LOC102313277,LOC102780548,LOC102199036,LOC101474638 coding downstream 85560 45598607 ~ 45629378 (+)
AMCG00009764 LOC103384391,LOC107373447 coding downstream 130191 45643238 ~ 45647541 (+)
AMCG00009765 NA coding downstream 137037 45650084 ~ 45656237 (+)
AMCG00009762 NA coding downstream 143714 45656761 ~ 45660486 (+)
G58821 NA non-coding upstream 114183 45339605 ~ 45398453 (+)
G58822 NA non-coding upstream 179780 45329784 ~ 45332856 (+)
G58830 NA non-coding upstream 235040 45276488 ~ 45277596 (+)
G58825 NA non-coding upstream 237603 45266939 ~ 45275033 (+)
G58792 NA non-coding upstream 314372 45194523 ~ 45198264 (+)
G58971 NA non-coding downstream 71711 45584758 ~ 45585330 (+)
G59006 NA non-coding downstream 126588 45639635 ~ 45640037 (+)
G59026 NA non-coding downstream 160882 45673929 ~ 45674702 (+)
G59028 NA non-coding downstream 162656 45675703 ~ 45683641 (+)
G59047 NA non-coding downstream 188920 45701967 ~ 45702889 (+)
AMCG00009761 NA other upstream 1599 45507767 ~ 45511037 (+)
G58747 NA other upstream 454762 45056065 ~ 45057874 (+)
AMCG00009706 pim1 other upstream 752578 44750176 ~ 44760058 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other upstream 860669 44632750 ~ 44651967 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other upstream 909027 44584562 ~ 44603609 (+)
AMCG00009759 NA other downstream 46930 45559977 ~ 45572255 (+)
AMCG00009760 NA other downstream 60223 45573270 ~ 45575964 (+)
AMCG00009758 abcd1,LOC107701814,LOC107743108,LOC108440542,LOC107674359,LOC107552221,LOC107727428 other downstream 63492 45576539 ~ 45584727 (+)
G59084 NA other downstream 241539 45754586 ~ 45755115 (+)
AMCG00009782 LOC108266008,LOC103385383 other downstream 431585 45944632 ~ 45997710 (+)

Expression


Co-expression Network