G59006


Basic Information

Item Value
gene id G59006
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45639635 ~ 45640037 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU73754
gtatttgtgtgtgtgcgtgtagtttctgtaacatgtcttTAACagtgtgttaatttacatccatacaatcacAGATGCACCATAGAAATTGGGTTTCGTGTCTGTAGATGGCAGTGTTAATGCAACACTGCCTCCTATGGACACGTCAACCTTACGTGCAAGTGTGCTAGCAGACAGCTGTGCGACCGTCTGCGTACGATGCCCACACATGTATAAGTATTAACCAGCCTTTACCTGAGGACCCAGAGGGGGGGGGTGCGCCGGACTGCTGCCACACTGTGGCCTCGGCGGCCATGCGGCGGATGTAGACGTCATCCACACACATCAGGATGTTCTCCGGCTTGATATCCGTGTGGATGATCTTACACTTGGTGTGCAAGTAGTCCAGACCCTGCAGGACCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73754 True 403 lncRNA 0.51 1 45639635 45640037

Neighbor

gene id symbol gene type direction distance location
AMCG00009763 plxnb3,LOC101165957,LOC102313277,LOC102780548,LOC102199036,LOC101474638 coding upstream 10257 45598607 ~ 45629378 (+)
AMCG00009757 NA coding upstream 108199 45521353 ~ 45531436 (+)
AMCG00009750 NA coding upstream 162638 45466659 ~ 45476997 (+)
AMCG00009752 NA coding upstream 185656 45437969 ~ 45453979 (+)
AMCG00009751 NA coding upstream 203770 45422527 ~ 45435865 (+)
AMCG00009764 LOC103384391,LOC107373447 coding downstream 3201 45643238 ~ 45647541 (+)
AMCG00009765 NA coding downstream 10047 45650084 ~ 45656237 (+)
AMCG00009762 NA coding downstream 16724 45656761 ~ 45660486 (+)
AMCG00009772 NA coding downstream 235596 45875633 ~ 45879015 (+)
AMCG00009778 NA coding downstream 264850 45904887 ~ 45913188 (+)
G58971 NA non-coding upstream 54305 45584758 ~ 45585330 (+)
G58876 NA non-coding upstream 126588 45512636 ~ 45513047 (+)
G58821 NA non-coding upstream 241182 45339605 ~ 45398453 (+)
G58822 NA non-coding upstream 306779 45329784 ~ 45332856 (+)
G58830 NA non-coding upstream 362039 45276488 ~ 45277596 (+)
G59026 NA non-coding downstream 33892 45673929 ~ 45674702 (+)
G59028 NA non-coding downstream 35666 45675703 ~ 45683641 (+)
G59047 NA non-coding downstream 61930 45701967 ~ 45702889 (+)
G59076 NA non-coding downstream 105904 45745941 ~ 45746254 (+)
G59078 NA non-coding downstream 107483 45747520 ~ 45748462 (+)
AMCG00009758 abcd1,LOC107701814,LOC107743108,LOC108440542,LOC107674359,LOC107552221,LOC107727428 other upstream 54908 45576539 ~ 45584727 (+)
AMCG00009760 NA other upstream 63671 45573270 ~ 45575964 (+)
AMCG00009759 NA other upstream 67380 45559977 ~ 45572255 (+)
AMCG00009761 NA other upstream 128598 45507767 ~ 45511037 (+)
G58747 NA other upstream 581761 45056065 ~ 45057874 (+)
G59084 NA other downstream 114549 45754586 ~ 45755115 (+)
AMCG00009782 LOC108266008,LOC103385383 other downstream 304595 45944632 ~ 45997710 (+)
AMCG00009781 NA other downstream 360005 46000042 ~ 46022184 (+)
AMCG00009786 NA other downstream 464099 46104136 ~ 46128356 (+)

Expression


Co-expression Network