AMCG00010667


Basic Information

Item Value
gene id AMCG00010667
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 38476910 ~ 38483422 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010667
CGATGGACCCTTGctggaagttttgaaagtgtttGAATGCGTTTCGCACCGAACTGAGCCGAACATCGACTCTGGGCTTTAACGGAGGCGCTCGGCATGGCGGCACCAGGTCCGAACAAGGATAATATTAGAGCAGGATGCAAGAAATGTGGATACCCTGGCCACTTGACGTTCGAGTGCCGTAACTTCGTGCGGGTGGATCCTGGGAAGGACATTGTTCTGGACGTGAGCAGCACCAGCAGCGAGGAGAGCGAGGAGGAGCCGCAGGGCGACCCGGACAGCGAGAGAGTGCAGCCCGGCGCCGCCAGCAAGGGTTCATCAGAAGACGTGAAGAAAGGACATCCCAAGAAGAAAAGCAAGGAAAAATCTTCCCACAAAAAGTTAAGAAAGAGGTCGTGCACGTCCAGCGACGAAGAGGGGGAGCCCAGGAGGAAGAAGCCGAAATCCCACAAGAAGAAAACCAGGCGGGAGAAGAAGCACAAGAAGGAGAAGCGACACAAGAAGGAGGGCAAGAAGAGCAAGAAGCGCAGCCGCACCTCGTCAGAGAGCTCCAGCGCCTCCTCGGACAGCAGCTAGTGCGGCTGTGGGTCTGGACTCAGCCCCCCCCGCCGGGACAGAGGGGGTGCGCGCCGCatcgggggaggggggggttgtacatgctttatttcattttcttgtcattattttaaagacattccTGTTAATGCATAAGATCTTTCTCAACACTTGGGTGGCAGATGTTGTAAATATGTGAATAAAAGTGAAACGCCCTCAGCAGTTGTTTCCTGAATCTCCGTCCCCACCCCCCTCACATTCTAGAGCTCCTAGATCGAACGGCCGTAATTACCTGGGAATGGTCCCCCTCCaaaaacaacgttgtttcatacagatttagttttatttgtttttacttattggAAGGCCTTTGCCCTGATCAAGATGGATGAAAATGTCATACTCGTGGCATTTCTGGAatgctgttttctgtctctgtaAAAGGTTTGAGTTAAAGTGAACTTCATTTCAAGGCAGTACAGGTCAGAGCCCTCAACAGTCATGACGTACGAATCGCCAAAGAGTAATTTTATCTGTTGAGTTTGAGTTGTCCGGTTTAATGCAAGCATACAGATGGGGTTTTACAGGACAACGTGCCGAATGCAGCCAGCCGTTGTCTATTGGGGAAGTTTGATATAAGAAGACCAAATATTTAGTGTTTCTCAGGGTTTGGGTCAATGTGTCCCAGTTTTTTATGATTTCATTGTCCTTTGTAGCTTTATTGGAAAGTCAACATGAATGAACTCTGAACTTTGATTTGCTTGTGTCCAGTGTAGGTTTCTCTGCTTTGTATCTGACAGACCCTTATGTTTTTGGGTCTCGAacatcatgaaaataaatagtgattCTCGCTGGCATCTCTCTGTTGTGTTCGGTGTCTCCAAAGGGATCCAGGCATTGCAGAACAGTGATGTTGTGTACCAGGAACGCCATCCCATGCATCCACACGCTGATCATTTCCCCCGAAATCGGGTTATATTTCAAATCAGCCGGATGCTGGGCGGACAGGAAACTGACACAAATCCCACCCAAGCTGTCGATCCGTGCAATACACAAgctcatatacagtgagggaaaaaagtatttgattccctgctgattttgtacgtttgcccactgacaaaaaaatgat
>TU102754
CGTGCACTTATTTTTTGAGTAAAGCTTTAGATATTAGTCATGTCTAAAGCAGTACAAAGCAGAGCCCTAAGCTTTGTTTCCGCGGGGAGGGCATTAAGCGATGGACCCTTGctggaagttttgaaagtgtttGAATGCGTTTCGCACCGAACTGAGCCGAACATCGACTCTGGGCTTTAACGGAGGCGCTCGGCATGGCGGCACCAGGTCCGAACAAGGATAATATTAGAGCAGGATGCAAGAAATGTGGATACCCTGGCCACTTGACGTTCGAGTGCCGTAACTTCGTGCGGGTGGATCCTGGGAAGGACATTGTTCTGGACGTGAGCAGCACCAGCAGCGAGGAGAGCGAGGAGGAGCCGCAGGGCGACCCGGACAGCGAGAGAGTGCAGCCCGGCGCCGCCAGCAAGGGTTCATCAGAAGACGTGAAGAAAGGACATCCCAAGAAGAAAAGCAAGGAAAAATCTTCCCACAAAAAGTTAAGAAAGAGGTCGTGCACGTCCAGCGACGAAGAGGGGGAGCCCAGGAGGAAGAAGCCGAAATCCCACAAGAAGAAAACCAGGCGGGAGAAGAAGCACAAGAAGGAGAAGCGACACAAGAAGGAGGGCAAGAAGAGCAAGAAGCGCAGCCGCACCTCGTCAGAGAGCTCCAGCGCCTCCTCGGACAGCAGCTAGTGCGGCTGTGGGTCTGGACTCAGCCCCCCCCGCCGGGACAGAGGGGGTGCGCGCCGCatcgggggaggggggggttgtacatgctttatttcattttcttgtcattattttaaagacattccTGTTAATGCATAAGATCTTTCTCAACACTTGGGTGGCAGATGTTGTAAATATGTGAATAAAAGTGAAACGCCCTCAGCAGTTGTTTCCTGAATCTCCGTCCCCACCCCCCTCACATTCTAGAGCTCCTAGATCGAACGGCCGTAATTACCTGGGAATGGTCCCCCTCCaaaaacaacgttgtttcatacagatttagttttatttgtttttacttattggAAGGCCTTTGCCCTGATCAAGATGGATGAAAATGTCATACTCGTGGCATTTCTGGAatgctgttttctgtctctgtaAAAGGTTTGAGTTAAAGTGAACTTCATTTCAAGGCAGTACAGGTCAGAGCCCTCAACAGTCATGACGTACGAATCGCCAAAGAGTAATTTTATCTGTTGAGTTTGAGTTGTCCGGTTTAATGCAAGCATACAGATGGGGTTTTACAGGACAACGTGCCGAATGCAGCCAGCCGTTGTCTATTGGGGAAGTTTGATATAAGAAGACCAAATATTTAGTGTTTCTCAGGGTTTGGGTCAATGTGTCCCAGTTTTTTATGATTTCATTGTCCTTTGTAGCTTTATTGGAAAGTCAACATGAATGAACTCTGAACTTTGATTTGCTTGTGTCCAGTGTAGGTTTCTCTGCTTTGTATCTGACAGACCCTTATGTTTTTGGGTCTCGAacatcatga

Function

GO:

id name namespace
GO:0006397 mRNA processing biological_process
GO:0008380 RNA splicing biological_process
GO:0003676 nucleic acid binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010667 True 1687 mRNA 0.48 5 38476910 38483324
TU102754 False 1485 TUCP 0.48 5 38477210 38483422

Neighbor

gene id symbol gene type direction distance location
AMCG00010662 NA coding downstream 33621 38425843 ~ 38443289 (-)
AMCG00010665 NA coding downstream 55250 38403007 ~ 38421660 (-)
AMCG00010663 scd5,LOC106562327,LOC106568335 coding downstream 75027 38386532 ~ 38401883 (-)
AMCG00010668 LOC107558253 coding downstream 91209 38380527 ~ 38385701 (-)
AMCG00010658 hnrnpd,LOC102781216,LOC102314153 coding downstream 106886 38356423 ~ 38370024 (-)
AMCG00010678 adamts6 coding upstream 80654 38564076 ~ 38607856 (-)
AMCG00010677 LOC107558663 coding upstream 125152 38608574 ~ 38622991 (-)
AMCG00010680 ppwd1 coding upstream 157146 38640568 ~ 38641283 (-)
AMCG00010676 trim23 coding upstream 159040 38642462 ~ 38649992 (-)
AMCG00010683 sgtb coding upstream 179605 38663027 ~ 38669527 (-)
G82252 NA non-coding downstream 189375 38285755 ~ 38287535 (-)
G82126 NA non-coding downstream 978797 37497718 ~ 37498113 (-)
G82125 NA non-coding downstream 982197 37492723 ~ 37494713 (-)
G82020 NA non-coding downstream 1117088 37357333 ~ 37359822 (-)
G82017 NA non-coding downstream 1120707 37355758 ~ 37356203 (-)
G82347 NA non-coding upstream 35243 38518665 ~ 38526795 (-)
G82362 NA non-coding upstream 143104 38626526 ~ 38626937 (-)
G82435 NA non-coding upstream 320404 38803826 ~ 38828301 (-)
G82436 NA non-coding upstream 337084 38820506 ~ 38820945 (-)
G82469 NA non-coding upstream 543639 39027061 ~ 39027421 (-)
AMCG00010664 NA other downstream 11849 38457774 ~ 38465061 (-)
AMCG00010666 NA other downstream 51843 38423479 ~ 38425067 (-)
AMCG00010623 NA other downstream 1068761 37405880 ~ 37408149 (-)
AMCG00010602 NA other downstream 1793092 36677697 ~ 36683818 (-)
AMCG00010597 ercc8 other downstream 1835217 36627901 ~ 36641693 (-)
AMCG00010679 ppwd1,LOC107558664 other upstream 151637 38635059 ~ 38636502 (-)
G82392 NA other upstream 171496 38654918 ~ 38688260 (-)
G82607 NA other upstream 1022162 39505584 ~ 39509159 (-)
AMCG00010704 NA other upstream 1047901 39531323 ~ 39552049 (-)
G82733 slc25a46,LOC106562119,LOC106568342 other upstream 1074109 39557531 ~ 39619815 (-)

Expression


Co-expression Network