G81716


Basic Information

Item Value
gene id G81716
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 35714951 ~ 35716672 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU101930
aacatacaatttacaacaaaaacagaaaaagtgaacatttattttacaccgAGCCTAACTTTAGGCTGCTAGACTGTACACAATGGTAATCAAGACACATTGACAGCAACAATCTGTGCACAAGACAtcatccataaaaaaaaaaaaaagtactgcaTAATTTAGACACCATATTAACACTACAGTGAAATGACAAAGTTCCAGTGGAAATCGGGACAATGTGCAAACAAACAGGTTTCACTTTGTATAACTTCCTTTAGACAATGAGCCATTATCAGTGGTGCTTCTGCATGAATCTATAACAGACACTTGCTGGTGTGTAACAAGTCTTTTCAGAGATGTAACTTCTGCCGACAAGTCAGAAATTCCctgttttaaatacaagttttcCGACTCTGTGTCATTGTAAGAACTGTCTTTGAGGTCAACAATGAGTTTACTCGTGAACGGCCCAGGCGAGCTGGGACACAGTCTGTTTTTGCAGCCACTCTGAATGATCTCTGGCTGGTCCTTGTTATGCCAGTGCTCTGGCCGGTGAGCCCAGTCCCGGAGATTATTGACTTGGAGAGATAAAGGACTGAGAGAGGACTGGATCAAATCAGAAGCTGTGCGTTTCCCCGTCTCATAACACCCTTTAGCAGACATGCCAATGGGAAAAGACGGTTTCCCTGAAGACTCATAGTCCGGATCTATGGCCTCCACTTTGATCTGAATGGCTCTGGCCTTGATCCTAAGTTTATGGGGCAGGGCTGAGGAGTGTGCGTCTGGTACCTTAACGACAGAAGCGACCACGATCTTTGGGTCCACCGGAGAAGGAATCGGACCTTTGGGAACCTGCTGTTCATCTTCTCCGTCTGAAGCTTTGCCCACGGTGCCTTCGTCCCCTTCTGAGGTTCGGGGGGAGTTGCTGGAAGACCTGACGATTTGTAAAATGGGAGAAGGCTGGGAGTACCCTACGGGGAATGGGTTTGCCATGTAGTTCCGGTACAAGTCATAAGGACTGTTCTCTCTTGCCTCCTGTGGGTAACTGACATTTTCTAGTGGTTCTCGTTTGATTATTTCCGGGGTCCTGCAAGTATTCCGCAGAGGGCTGTCCTGGGCAATCACAGAGGTTTCAGACGCATCTGACAGGGTACTGTGCGGAGAGTGCTTTATAACAGAAATGCAACTGCTGCTGACCAAAGGGGGCTCTGGGTCCCCGGAGTAAGAGCTTCTGCTCGTGTTGGCCGAGTTAAACTCCTGATAGAACGCAGCGGTGGAAGTTGAAAGCTTCTGCACCTCTTGGGCGTAGGCTGAAGAACTGACTAGACCGAACTTGAGTTTCAGGGACAACAGCTCGGATTTCAAGGTAGCGTTCTCCTCTCCCAAAGCCATCAGTTTATTCTCCAGGACCATGTCGTTGAGCCTCCGCTTCTCTCTGGACCGCTTGGCAGCTTCGTTGTTTTTCCGGCGCTTCTCCCAGTATTGATCATCTTTCTTTTCGTCTGGGATGAACTCCCGTTTTCTGCGGCACGACGAGTTTTTCGACTTGAAGCCCACACCTGGTAATTTGTGAGACACCAAGTCCCCATCTGAGCCTTGTAAAGCTGCAGCCAGTACTAGAACATTATCTCCACTACAAGAGTCCATCGTTGGCTGTTCCTTCTTGATTGCTTGCATATTCTGTGTTTGAAAActgttttggctttttttttatatatacactatatatatatatatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101930 True 1722 TUCP 0.46 1 35714951 35716672

Neighbor

gene id symbol gene type direction distance location
AMCG00010571 NA coding downstream 19054 35688341 ~ 35695897 (-)
AMCG00010567 NA coding downstream 30700 35657391 ~ 35684251 (-)
AMCG00010565 ror2 coding downstream 84907 35621893 ~ 35630044 (-)
AMCG00010561 hint1 coding downstream 240636 35470450 ~ 35474315 (-)
AMCG00010554 NA coding downstream 593801 35107227 ~ 35121150 (-)
AMCG00010573 NA coding upstream 59564 35776236 ~ 35803483 (-)
AMCG00010577 gadd45g coding upstream 217057 35933729 ~ 35939378 (-)
AMCG00010575 NA coding upstream 228736 35945408 ~ 35952660 (-)
AMCG00010576 NA coding upstream 237928 35954600 ~ 35958473 (-)
AMCG00010581 znf131 coding upstream 259798 35976470 ~ 35980206 (-)
G81698 NA non-coding downstream 48273 35662076 ~ 35666678 (-)
G81652 NA non-coding downstream 188182 35523680 ~ 35526769 (-)
G81636 NA non-coding downstream 303213 35411526 ~ 35411738 (-)
G81608 NA non-coding downstream 575028 35139363 ~ 35139923 (-)
G81547 prrc1,LOC107572184 non-coding downstream 853484 34856340 ~ 34861467 (-)
G81772 NA non-coding upstream 270324 35986996 ~ 35990634 (-)
G81827 NA non-coding upstream 558244 36274916 ~ 36305127 (-)
G81957 NA non-coding upstream 1412221 37128893 ~ 37129266 (-)
G81973 NA non-coding upstream 1513775 37230447 ~ 37231375 (-)
G81979 NA non-coding upstream 1525767 37242439 ~ 37245114 (-)
AMCG00010532 ppic,LOC107713556 other downstream 1610279 34098346 ~ 34104672 (-)
AMCG00010509 fem1c,LOC106580179 other downstream 2714952 32993287 ~ 32999999 (-)
AMCG00010487 ppip5k2 other downstream 3717257 31954370 ~ 31997694 (-)
AMCG00010478 znf367,LOC107568105,LOC107704585 other downstream 4634629 31072452 ~ 31080322 (-)
AMCG00010458 LOC107396140 other downstream 5194570 30510970 ~ 30520381 (-)
AMCG00010597 ercc8 other upstream 911229 36627901 ~ 36641693 (-)
AMCG00010602 NA other upstream 961025 36677697 ~ 36683818 (-)
AMCG00010623 NA other upstream 1689208 37405880 ~ 37408149 (-)
AMCG00010666 NA other upstream 2706807 38423479 ~ 38425067 (-)
AMCG00010664 NA other upstream 2741102 38457774 ~ 38465061 (-)

Expression


Co-expression Network