AMCG00010576


Basic Information

Item Value
gene id AMCG00010576
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 35954600 ~ 35958473 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010576
ATGACGGCGGTGTACGCGAATGGGGGGACGCTGGGAAGACAGCGGTATGCGAGGTGGAGCCGGCAGGACAGCGCCGAGGACTACCTGCGCACCGAGTGCTTCAccgaggaggagggggggcagcAGCGCCGGCTCACCCCCTTTGAGAAGCTCACCCTGGACATGTCCCACGACGAGAAGGTGGTGAAGGAGCTCACCCTGGGCAAGAGGATCGGCTTCTACCGGGTCCGCGGCGAAATCGGCAGCGGCAACTTCTCCCACGTCAAACTGGGTGTCCACTCCCTCACTAAAGAGAAAGTGGCCATTAAAATCCTGGACAAGACCAAGCTGGACCAGAAGACCCAGCGGCTGCTGTCCAGGGAGATCTCCAGCATGGAGAGGCTGCACCACCCCAATGTGATCCGACTTTACGAGGTGGTGGAGACGCTGTCCCGGCTGCACCTGGTCATGGAGTACGCCGGGGGAGGGGAGCTCTTCGCCAAGATCAACACAGAGGGCAAGCTGTCTGACATTGACTGCAGGATCCATGACAGCAGCATCATTCACCGGGACCTGAAGGCGGAGAATGTGTTTTACACGTGCAACACCTGTGTGAAAGTGGGGGACTTTGGCTTCAGCACAATCAGCAAGAAGGAGGAGACCCTGAACACTTTCTGCGGCTCCCCCCCATACGCGGCGCCCGAGCTCTTCCGAGACGAGAGCTACGTTGGCGTGTACGTGGACGTGTGGGCCCTGGGCATCCTGCTCTTCTTCATGGTGACCGGCACCATGCCCTTCCGTGCCGATACTGTGGCCAAGCTGAAGAAGTGCATCCTGGAGGGCAGCTACACCATCCCACCCTTTGTGCCCGAGCCCTGCCAGAAGCTCCTCAAGGGCATCCTGCAGCCGGGGCCCACCGACCGCTACTCCTTGGAGCAAATTATGAAGTGCGAGTGGCTGCACCCCGTGGAGTTCCCCTCACCCATGGAGCCCTTCAAACTGGACCCCCAGTACCTGGCCGAGTCCGCGGAGCTGGACGAGGACGAGGTGGAGGTGAAGGGGGCACTGGAGAGCCTGGGCATCACAGAGGAGCACATCCGCAACAACCAGGGCAAGGACTGCCGCAGCTCCATCACCGGGGTCTACCGGATCCTGCTCCACCGCGTGCAGAAGAGGAGGGCGGTGGACAGTATGCCCGTGGTGACCCACCTGGTCCAAGAGCCCAAGAAGGAGAGGCAGAGGCCGTCCAGAGAGATCCGGCACACGTCCAAACTCTGCTCCATTTTGTAA

Function

GO: NA

KEGG:

id description
K16310 NIM1; serine/threonine-protein kinase NIM1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010576 True 1269 mRNA 0.61 3 35954600 35958473

Neighbor

gene id symbol gene type direction distance location
AMCG00010575 NA coding downstream 1940 35945408 ~ 35952660 (-)
AMCG00010577 gadd45g coding downstream 15222 35933729 ~ 35939378 (-)
AMCG00010573 NA coding downstream 151117 35776236 ~ 35803483 (-)
AMCG00010571 NA coding downstream 258703 35688341 ~ 35695897 (-)
AMCG00010567 NA coding downstream 270349 35657391 ~ 35684251 (-)
AMCG00010581 znf131 coding upstream 17997 35976470 ~ 35980206 (-)
AMCG00010580 NA coding upstream 40052 35998525 ~ 36011345 (-)
AMCG00010586 NA coding upstream 153767 36112240 ~ 36118601 (-)
AMCG00010587 LOC108425197,LOC107653495,LOC107602251,LOC107588929,LOC108277216,LOC107709193,LOC107706772 coding upstream 289592 36248065 ~ 36253336 (-)
AMCG00010588 NA coding upstream 298417 36256890 ~ 36264978 (-)
G81698 NA non-coding downstream 287922 35662076 ~ 35666678 (-)
G81652 NA non-coding downstream 427831 35523680 ~ 35526769 (-)
G81636 NA non-coding downstream 542862 35411526 ~ 35411738 (-)
G81608 NA non-coding downstream 814677 35139363 ~ 35139923 (-)
G81547 prrc1,LOC107572184 non-coding downstream 1093133 34856340 ~ 34861467 (-)
G81772 NA non-coding upstream 28523 35986996 ~ 35990634 (-)
G81827 NA non-coding upstream 316443 36274916 ~ 36305127 (-)
G81957 NA non-coding upstream 1170420 37128893 ~ 37129266 (-)
G81973 NA non-coding upstream 1271974 37230447 ~ 37231375 (-)
G81979 NA non-coding upstream 1283966 37242439 ~ 37245114 (-)
G81716 NA other downstream 237928 35714951 ~ 35716672 (-)
AMCG00010532 ppic,LOC107713556 other downstream 1849928 34098346 ~ 34104672 (-)
AMCG00010509 fem1c,LOC106580179 other downstream 2954601 32993287 ~ 32999999 (-)
AMCG00010487 ppip5k2 other downstream 3956906 31954370 ~ 31997694 (-)
AMCG00010478 znf367,LOC107568105,LOC107704585 other downstream 4874278 31072452 ~ 31080322 (-)
AMCG00010597 ercc8 other upstream 669428 36627901 ~ 36641693 (-)
AMCG00010602 NA other upstream 719224 36677697 ~ 36683818 (-)
AMCG00010623 NA other upstream 1447407 37405880 ~ 37408149 (-)
AMCG00010666 NA other upstream 2465006 38423479 ~ 38425067 (-)
AMCG00010664 NA other upstream 2499301 38457774 ~ 38465061 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location