AMCG00010588


Basic Information

Item Value
gene id AMCG00010588
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 36256890 ~ 36264978 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010588
TAGGAAACACCAGTGAGCTGCCACCGCAGTCCAGTATGGAGGACGCCATAGAGGTTATTCTGCAGGATCAAAGCTCAAAGTTCACCCACCAGCACAATCACCGCGTGACTGTGGCTGTAGGGGGGCTGCTGGCTGGCCTGTACGGGCTGTGGACAATGTTTGTACTGCCTGGATTCCGGAAAGTGCCATTTAAGTTGAAGGTACCGTATTTGCCTTCCAGTAATACACAGACCCAGAATGTTATGAAACTTCTGGACGGACGCAGAGGACACCTGGCCGATCTCGGTTCAGGTGATGGGAGGCTGGTGAGTCTTTCAGAGTTAGCTGATTATATGACCCGTTATACACTCACAGTGGGATCCCAGACCCTGTTAAGCAATAATGTCTTTGCAGCTTCATCTCTGGGATTGCAAAGCACTGGCTTTGAGATTAACTCTATATTGTTGTCATATGCAAGAACTAAGGCTCGCTGGATGGGAATTCCAAGTACTAATGTCAACTTTGTCAACAAGGATTTTTGGATGGCAGATCTCTCAAGGTACAATAATGTGACCATGTTTTTAGCTCCAGGTGTGATGGATGTCCTGGAGGAGAAGCTCCTGCTCGAACTCCCCGACGACGCCCGAGTCATCGCCTGCCGCTTCCCTTTCGCTCGGTGGCCGGCTACCTGCAGCGAGGGCTCGGGGCTGGATCAGGTGTGGGCCTACGACATGAGCACGCTCCGCAAGCCACCCGCCTCCCCTCGCCCCGTC

Function

GO:

id name namespace
GO:0140110 transcription regulator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010588 True 752 mRNA 0.53 5 36256890 36264978

Neighbor

gene id symbol gene type direction distance location
AMCG00010587 LOC108425197,LOC107653495,LOC107602251,LOC107588929,LOC108277216,LOC107709193,LOC107706772 coding downstream 3554 36248065 ~ 36253336 (-)
AMCG00010586 NA coding downstream 138289 36112240 ~ 36118601 (-)
AMCG00010580 NA coding downstream 245545 35998525 ~ 36011345 (-)
AMCG00010581 znf131 coding downstream 276684 35976470 ~ 35980206 (-)
AMCG00010576 NA coding downstream 298417 35954600 ~ 35958473 (-)
AMCG00010592 pde4d coding upstream 43951 36308929 ~ 36319057 (-)
AMCG00010593 NA coding upstream 87218 36352196 ~ 36353920 (-)
AMCG00010594 NA coding upstream 204564 36469542 ~ 36469817 (-)
AMCG00010599 NA coding upstream 217264 36482242 ~ 36514923 (-)
AMCG00010600 NA coding upstream 260890 36525868 ~ 36528104 (-)
G81772 NA non-coding downstream 266256 35986996 ~ 35990634 (-)
G81698 NA non-coding downstream 590212 35662076 ~ 35666678 (-)
G81652 NA non-coding downstream 730121 35523680 ~ 35526769 (-)
G81636 NA non-coding downstream 845152 35411526 ~ 35411738 (-)
G81608 NA non-coding downstream 1116967 35139363 ~ 35139923 (-)
G81827 NA non-coding upstream 9938 36274916 ~ 36305127 (-)
G81957 NA non-coding upstream 863915 37128893 ~ 37129266 (-)
G81973 NA non-coding upstream 965469 37230447 ~ 37231375 (-)
G81979 NA non-coding upstream 977461 37242439 ~ 37245114 (-)
G82002 NA non-coding upstream 1017939 37282917 ~ 37283315 (-)
G81716 NA other downstream 540218 35714951 ~ 35716672 (-)
AMCG00010532 ppic,LOC107713556 other downstream 2152218 34098346 ~ 34104672 (-)
AMCG00010509 fem1c,LOC106580179 other downstream 3256891 32993287 ~ 32999999 (-)
AMCG00010487 ppip5k2 other downstream 4259196 31954370 ~ 31997694 (-)
AMCG00010478 znf367,LOC107568105,LOC107704585 other downstream 5176568 31072452 ~ 31080322 (-)
AMCG00010597 ercc8 other upstream 362923 36627901 ~ 36641693 (-)
AMCG00010602 NA other upstream 412719 36677697 ~ 36683818 (-)
AMCG00010623 NA other upstream 1140902 37405880 ~ 37408149 (-)
AMCG00010666 NA other upstream 2158501 38423479 ~ 38425067 (-)
AMCG00010664 NA other upstream 2192796 38457774 ~ 38465061 (-)

Expression


Co-expression Network