AMCG00011156


Basic Information

Item Value
gene id AMCG00011156
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 12529830 ~ 12541377 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011156
ATGATGCTGGTTGAACACAAGCTGCTTGCTCTGGGCCCCACGGAGCCGTGGTCAGTGAAGGAGAAGTTGTGCCTGGCTTCTTCAGTCATGCGCAGTGGAGACCAGAACTGggtgtcGGTCAGTCGTGCCATCAAGCCATTTTCAGAGCCAGGCCGCCCCCCTGACTGGTTCTCCCAGAAGcactgtGCCTCTCAGTACTCAGAGCTGCTGGAGACAACAGAGACACCAAAgCGTAAGCGCGGGGAGAAGGGCGAGGTGGTGGAGACGGTGGAGGACttgaagaaagagTCGGAGTTGATCCAGGCTGGACATCTGGACAGTAAATTGGAAGAGCTGTGGAATGATGCCCTACTGAAAAAGAAgcaagaagaggaagaggcGGAGCTAAAGAGGAAGGCCACAGATGCGGCCTATCAGGcACGGCAGGCACTGAGGAATACCCCCAAGCGTGTGCCCAGTGTGACGGCCCCTGCTCCTACAGTGTTCCTGCCTCTGTCTGAGGGGCCTGGGCCCAGCCCCCTGGAGCCCAGCCTGGGGACTCTCCTGGACGACTCCCCCCAGAAGAAGCTCCTGGGTCAAAAGGCTACTCCGCCACCCTCCCCCCTGCTCTCTGAGCTTCTGAAGAAAGGGAGCCTGCTGCCCACCAGCCCCAGACTGGTGGGGGAGGGAGACGTGCCGGCGGGGCACATGGCTGGCGCACATGGGGCTGGCCCCACCCACTTTGCCGCTCCCCTCGGCCCCGCCCTATCTGCCAGCACTGAGCCCCCTGCTGCCGCCACTGCTGCGCCAACGCTGGCCCCCACGGACGCCCCCCGCCGCGCTGACACCCCCGAGACTCACAACACAGgtgtggaCCCAGGTGCAAGTGCCCCAGGGCTGGGCAGTGCAGCCCCAACAGAGGTGAAGGGGGAgttgggggaggaggaggagctggtggCGGTGTCTTATATTGGGGACGAGCTGGACCTGGAGACTGTGGGGGACATCATTGCCATCATTGAGGAGAAGgTGGATGACAACGCGGAGGCCCTGGACGCAGCGGCCGTGGAGGCAGCTCTGTCCCTGTGTGAGGAAGCCACTGACCCCCACTCCCTGTCCGGCCCCTGGGAGCCCACCTCGTTCAAGCCCCCGGACACAGCCACAGCTCCCCCTCCTGGCCCTCCCGTGCACTGCAGTCTGGAAGTCAAGCAGGAGCAGCCCGAGGAGGAGCAGGCAGGGGCGAGGGAAGGGGCTGCAGCGCGGGAGCTAGGaactgcctcctcctcctcctcctcctctgctgcCCTGCCTGCTCCTGTCTCCAGGGACACAGCAGCCACACCCAGTAACCAACCCCCTGCCCCGTCCCTCCCTCCACACCCCCCTGTTGCCGGGAGTCACACGGCGCGCCCCACAACCCTGCACACCACCGCCGACTCCATCCCCAGCAGCCCCGCCTCCTCACAGTTgACGGAGGCACCAGGGGCAGGAGGTGCGCCATCGAAGCTGACATGAAGATGAAGAAATGAGAGCGAAACATGATCAAAGGCAGGATGGAGAGAGCCAGAGATGGACCGTTCCAAAAGACAGCCCTTCACACTCGGCATGCGTGCGAGTGTGTGTCCCGTTCACAGTGAATGTGACAGACTGTCAGTGCTGGAGGGGTCTGCTGTGAATGCAGTCCCGCTGCAGAAGTGTCCATTGTAAACTTGGCGGGAGGGGGCTGTGCTTGGCTATGTGTGACTGTAGGTTACAGTTATGGACAAAACTGCAATAATGTCATGACAGTCTccgtgtctcagtgtgtgagtCCAGTGCTGGTGTGTACAGTGTCAGTCTCAATGTTCTGTTGTgtgttcattttcctttttttgtgcttcatattaaatgtttaataaagaactaaattaaaacactgaaatgagtATGGAGtcctgtgtttatgtgtgtgagagagaggtggagagggaAAGAGTTGATGGAGTGTG

Function

GO: NA

KEGG:

id description
K11321 BRD8; bromodomain-containing protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011156 True 1967 mRNA 0.60 15 12529830 12541377

Neighbor

gene id symbol gene type direction distance location
AMCG00011157 nhp2,LOC107673822,LOC107590037,LOC107684699,LOC107715316,LOC106603897 coding downstream 2699 12510824 ~ 12527131 (-)
AMCG00011154 NA coding downstream 21885 12505814 ~ 12507945 (-)
AMCG00011159 NA coding downstream 30731 12497347 ~ 12499099 (-)
AMCG00011151 NA coding downstream 127760 12388263 ~ 12402070 (-)
AMCG00011149 NA coding downstream 223623 12300785 ~ 12306207 (-)
AMCG00011155 cdc23,LOC107692994,LOC106603039 coding upstream 9831 12551208 ~ 12556643 (-)
AMCG00011166 NA coding upstream 40728 12582105 ~ 12595413 (-)
AMCG00011167 NA coding upstream 54757 12596134 ~ 12605644 (-)
AMCG00011170 NA coding upstream 274050 12815427 ~ 12819344 (-)
AMCG00011173 NA coding upstream 425160 12966537 ~ 12984196 (-)
G104697 NA non-coding downstream 5472 12523837 ~ 12524358 (-)
G104680 NA non-coding downstream 36729 12429965 ~ 12493101 (-)
G104665 NA non-coding downstream 127266 12402364 ~ 12402564 (-)
G104660 NA non-coding downstream 150163 12375067 ~ 12379667 (-)
G104598 NA non-coding downstream 373099 12156442 ~ 12156731 (-)
G104776 NA non-coding upstream 219668 12761045 ~ 12763667 (-)
G104845 NA non-coding upstream 387295 12928672 ~ 12931083 (-)
G104846 NA non-coding upstream 394105 12935482 ~ 12940160 (-)
G104915 NA non-coding upstream 834756 13376133 ~ 13376997 (-)
G104916 NA non-coding upstream 836680 13378057 ~ 13378299 (-)
AMCG00011152 kcnip1 other downstream 72503 12427993 ~ 12457327 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other downstream 201548 12326097 ~ 12328282 (-)
AMCG00011135 NA other downstream 460751 12066495 ~ 12069079 (-)
AMCG00011140 NA other downstream 532044 11990829 ~ 11997786 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other downstream 558828 11959238 ~ 11971002 (-)
G104715 NA other upstream 6912 12548289 ~ 12548993 (-)
G104749 NA other upstream 93479 12634856 ~ 12640227 (-)
AMCG00011169 NA other upstream 279648 12821025 ~ 12826880 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other upstream 401013 12942390 ~ 12956267 (-)
G104909 NA other upstream 823706 13365083 ~ 13367074 (-)

Expression


Co-expression Network