G102785


Basic Information

Item Value
gene id G102785
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 2789470 ~ 2833183 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU128365
cacacacacacacacacaaacacacacacacacacacacacacacacacacacgtcagaTTGAACACGAAAACAAGccagtgtatataaaaaatagaaaacattttattggaaACCAActaaagtgcaataaatgttTACTCGCTTGCATCTCAGCGGAACACAAGCAATTGCAGTGAAACAGTAAGGATACAGTACAATACGACTAAGTCTGgagtaaaacaataacataaattatagtacaaaactgtacatgacctatttacattatttacacaaGGCACATTTGTCAAGAGTCAGATTCCATCgtttctttaaatatacagtaagcAATGTCATCAACAGTAATTCTCTAAAAAGCCACATTTTCAATGCGTTGTTTCGTTTCTTGAAGatggataatatatatatatatgtatatatatactttccTCTCAGGCATTCTCGAAGGCCACATGGGACACATTGCCACATCACAGGATGCAGAAGAGACTCAGGGCGATGCTCTCAGGGCATCGGTCTATTGAGAAATACAGCATTTCACAACGGCGGGGTTCTACGTCACAGTGCCTCAGGTTAAGTGCTATGGGGGGGTACGAGGGCAGTTGTGCAAATCAAACTAAGTTGGCTTCACTGCCTGTCTTCGCTGCCCGAGCAGGACTGGATCCGGGGACACCAGGTCTCACTCTGGGTCAGACATGATTATAACCATCGCAGGGGTTTGGGACACGTTTATCTCGGTTCAGTCTGTCTGTTCAGATCCGGTTCACGTACAGCTGCTGACAGAGACCCTGACTGCCCACCGCGGTGCTGAGCAGAGCCCTGGCACGGGGGGTCCGGACACCTGCCCTCGGGCACTGTCTGCCACACAGCACTCGACACGGTGACCTCCACGGGCCAGTCTCCTCAGCACCGGTGCCAACAGCAGGGCGGGAATGATCTGCGGCTCCAGTTCTGTACTGGGTCTGTCTCGGTGTGCGGGGGGCAGTGAATACATGTCAGTGCAGTGCAACCCTCTAacaaaacgagagagagagtggggtggtggggggctgtgtgtgtgtgtgtggaggggtgggggacCCTGATAAGAAAGCTATACATTTTCTCCTGTGAGGACCTTTTAGGAGAATATGGGACAATCCCAATTCAGTCAGGGCCACAGAGAGgtaaaatgaatgaagaatgGAAACAGGCCATTTATAGCaggcgttttgtttttgtaggtgTTCGGACAAACACCTATTTCAACAGAGGTGTGTTGCAACTGTAAACACATACCTCTAAAAATAGACGCTTCCTCTGTAAATGGAGTTGAGGATTGAAGTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128365 True 1331 lncRNA 0.47 2 2789470 2833183

Neighbor

gene id symbol gene type direction distance location
AMCG00010859 NA coding downstream 22201 2762526 ~ 2767269 (-)
AMCG00010858 wdtc1,LOC106605082,LOC106583467 coding downstream 65670 2712527 ~ 2723800 (-)
AMCG00010857 tmem222,LOC103368846,LOC106570241 coding downstream 82849 2694405 ~ 2706621 (-)
AMCG00010851 NA coding downstream 100060 2687066 ~ 2689410 (-)
AMCG00010848 NA coding downstream 127612 2649261 ~ 2661858 (-)
AMCG00010867 NA coding upstream 111012 2944195 ~ 2945511 (-)
AMCG00010868 NA coding upstream 126092 2959275 ~ 2971015 (-)
AMCG00010873 LOC101163182,LOC101080136,LOC107569308,LOC107754925,LOC108229131,LOC107395731,LOC103130392 coding upstream 143273 2976456 ~ 2984072 (-)
AMCG00010871 NA coding upstream 179410 3012593 ~ 3031562 (-)
AMCG00010872 si:ch211-195b13.1,LOC108273319,LOC108411161,LOC103036792,LOC107102671,LOC108251730,LOC103473069 coding upstream 201164 3034347 ~ 3044090 (-)
G102725 NA non-coding downstream 114334 2674563 ~ 2675136 (-)
G102651 NA non-coding downstream 351772 2386723 ~ 2437698 (-)
G102639 NA non-coding downstream 426360 2362880 ~ 2363110 (-)
G102629 NA non-coding downstream 472206 2316765 ~ 2317264 (-)
G102623 NA non-coding downstream 537003 2252119 ~ 2252467 (-)
G102816 NA non-coding upstream 121577 2954760 ~ 2954975 (-)
G102834 NA non-coding upstream 157464 2990647 ~ 2991248 (-)
G102887 NA non-coding upstream 312081 3145264 ~ 3145687 (-)
G102888 NA non-coding upstream 326654 3159837 ~ 3160036 (-)
G102889 NA non-coding upstream 327400 3160583 ~ 3160897 (-)
G102762 NA other downstream 11447 2739816 ~ 2778023 (-)
G102774 NA other downstream 28206 2758478 ~ 2761264 (-)
AMCG00010843 NA other downstream 293024 2481874 ~ 2496446 (-)
AMCG00010806 NA other downstream 1754596 1033830 ~ 1034874 (-)
G102434 NA other downstream 1811343 975553 ~ 978127 (-)
G102902 LOC104921322 other upstream 346787 3179970 ~ 3182619 (-)
G102990 NA other upstream 487630 3320813 ~ 3419176 (-)
AMCG00010895 NA other upstream 488193 3321376 ~ 3327559 (-)
AMCG00010901 NA other upstream 720803 3553986 ~ 3574815 (-)
G103112 NA other upstream 1336610 4169793 ~ 4185974 (-)

Expression


Co-expression Network