G103030


Basic Information

Item Value
gene id G103030
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 3577235 ~ 3580277 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU128716
GCTTTCTTTGAATGAACTTTATTCATTTGAACAAAGACAGAGGACAGCAGAAtagtatacaaaatataacaatgacaacaaaaaacaaatagacaaaGCAAAAGTAACACTTCCATTATAGTGCATCTCGACAGACAAATTAATCACCGTATCATACAGGCTTTCTAATGATGGGAGTGTCTATCTTACCTAGGGATTCATGCTCACAACCTCCTGCTCCTGTTCCTCATTAGTGCGTTTGTAGACAGTGTTCCTCACCTGGGACATCTGCTATAGTCCCTTCTGACTTACAAGGGTTTCTGGTACAAAGTCTCTCTTTTAATTTCCAgtacacacaatacacagcaGACCATTTCAGGGAGAGTCAGAGACCACGGCTTCCAGTGCACTCCTGTCCTAAGGTGTGCTACAGCAATCTATAATATCATTGATTCATCAAACAATAACACACTGGTTGTGCCAAATTTTCAACTGTCTGTAAATATATTCAATTCCACTAGAGGGCATATATTACCTCTGAAATTATACTATGACCCTGAAGTATCACAATATGGCAATGTAGTGCTCATAAGTGTAAACAAAGGAGGACTTATTTTTCTGTGCTATACTGGTATTGGTTCCTATATCGGCCTCAGGGCCCTGGTTTTCTAGTGGTGTTCCCACAAAAAGGCACCAGTGAAATAAACAGTAAGGACATTTCATTGTAAATTGTCATCAGGAATATCAGAGCTGGTTATAGGAGATGCGCGCAGTGTTTGTAGCATGGATAGGAAATGCAAGTAGGTTTTGTTTGTGCTATGCTGAAGCTTGCGgtttaaatgtcttaaatgtTACGCAATATAAACAGACGTAACCCAGAACGCAGAGGTTAAATACCAGGTGCTTTGTGTGTATATTCATGGCTTGTGAATTGATAAAAATAagattgtaattgttattttctgcCAACATGTACAACAGTAACAATTTAACATTCAGGCCTGGAATAAGTatggattaaaaacattttgggcATTTCAGAGTATTCATTTCAGATCCTTAATAACTGTCAAATAAATGAGTTGGAATGGCAAATTCTTTCTTCCAAAATTTGGAAAAGGATTTGCACATctatcaagaaaaaaaaaggtatggAAAAGAGATTGTGTATTTggaacaaacatttattttcccatcgGTCTTTGGGATTATCAGGAGATAAAAAGGCGCAACATTTTTCAGCGGAACAGCAGCTGGACGAAATAAGTCAATTCCTTACTACAAAGATGAGCTCAATGGCTTCCTCGCTTCCAACCTTCATGTTTTCATCAGCGGTCACATTTCTGACAAAATAATTATGTCAAAACAGATCTGAAATATAGGTTAACATGTGATATCAAtatttattccaggtctgataTGCAataccatcatcatcatagtaaatcagtcttttcttttccctttctgtgtttgaaatgaCCGCAGTTTTGCTCCATCACTCTTCCAGAAGAGTTGAAAGGATCGAGTTGCCCGAGAAGGAGTCTGTGAGCTCAGTAGCTCCACCTGGTGTTGACCCAGCTCAGAGTGTAGGTGCTGCTGGCGTTGGCGAGCATGTGGCGCAGtacggcccggcccggcccccTGGCGCTGTGCAGTAGCCGATACCCGCTGGCATGCAGCTCCCGCATCACGCTGTACCAGAACCGCACCACCTCCTGGCTGCTGCCGGCCACCTCGAACCCGGCCCACTGCAGGTGAACCGTGAGAACCAGCTGCTGGATCTGCCTCAGAGTGCCGTCCAGAACCCAGCCCTCCACCACCCTCCACTCCGCACTCTCCAGGTCCGCATTGACATACTCCACCTGTGCCCCAACATCTCCATGATGGCACTTAGTTTCCTCGGTGTGGCTTTACTGTGCCCAGCCCTGAGGTTGCGCCAGTCCAGCCAAGTCTGGTGTTGATGCACCTCTCCTggggtctgtctgtctcttctgCCCGGGTCAAACTGGTGCACCTCACAGCCAGCGGCCGCCATCACGGACACAAAATCCTTGTCCTTCTGGTCCATGCTGGTGGGGAGGGGCAGGAACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128716 True 2074 TUCP 0.44 2 3577235 3580277

Neighbor

gene id symbol gene type direction distance location
AMCG00010897 NA coding upstream 26784 3549465 ~ 3550451 (+)
AMCG00010887 NA coding upstream 137726 3437321 ~ 3439509 (+)
AMCG00010890 NA coding upstream 179343 3388255 ~ 3397892 (+)
AMCG00010889 NA coding upstream 190878 3349756 ~ 3386357 (+)
AMCG00010885 NA coding upstream 293905 3277827 ~ 3283330 (+)
AMCG00010903 NA coding downstream 90178 3670455 ~ 3677090 (+)
AMCG00010905 LOC107688368,LOC107602377,LOC107654743 coding downstream 251037 3831314 ~ 3835049 (+)
AMCG00010907 NA coding downstream 309686 3889963 ~ 3893566 (+)
AMCG00010906 LOC107592052,LOC104955441 coding downstream 336012 3916289 ~ 3946921 (+)
AMCG00010908 NA coding downstream 440784 4021061 ~ 4024002 (+)
G102959 NA non-coding upstream 114732 3459862 ~ 3462503 (+)
G102945 NA non-coding upstream 119578 3434919 ~ 3457657 (+)
G102944 NA non-coding upstream 144088 3432815 ~ 3433147 (+)
G102859 NA non-coding upstream 446971 3093934 ~ 3130264 (+)
G102860 NA non-coding upstream 473593 3099921 ~ 3103642 (+)
G103035 NA non-coding downstream 12391 3592668 ~ 3593407 (+)
G103137 pou3f1,LOC107700687,LOC107716828,LOC107755232,LOC107597138 non-coding downstream 707746 4288023 ~ 4290680 (+)
G103150 NA non-coding downstream 857600 4437877 ~ 4438136 (+)
G103152 NA non-coding downstream 956060 4536337 ~ 4619656 (+)
G103258 NA non-coding downstream 1553950 5134227 ~ 5140721 (+)
G102947 NA other upstream 133701 3436618 ~ 3443534 (+)
AMCG00010888 NA other upstream 148806 3421082 ~ 3428429 (+)
G102921 NA other upstream 178729 3331584 ~ 3398506 (+)
AMCG00010886 NA other upstream 238819 3331719 ~ 3338416 (+)
AMCG00010884 NA other upstream 266282 3301956 ~ 3310953 (+)
G103078 NA other downstream 469661 4049938 ~ 4083586 (+)
AMCG00010922 NA other downstream 1054195 4634472 ~ 4642403 (+)
AMCG00010979 NA other downstream 2806759 6387036 ~ 6395484 (+)
G103542 NA other downstream 3061706 6641983 ~ 6642628 (+)
AMCG00010990 pum1 other downstream 3312120 6892397 ~ 6920931 (+)

Expression


Co-expression Network