G103684


Basic Information

Item Value
gene id G103684
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 7373675 ~ 7384727 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU129564
GGAAATGCTTACTATCCAGATGTCTACACCAATTACAGCTGACCAAGGACAAGTCACAAAAAGTTCAAGTTAGAGTTCCCTAACTGAGCTGGGAGGCCTTTAAGGACCAATGCCAGCTGCATTCTATATGGTTGAGTTTTTCCATGATTTCCTGAGAAGTTATCCTTGTTAGAAGTTGATTCCAGAAATGAAGCTCTTTCTCTGAATGTCTTGTCAGGTGTGCACGGTTATATTGTGGTTGAAGTTTGTGAGCTCAGATATAATAACCATGTTTGAGGAATTGAAAAtgtctaatttaaatgtaaagagaaACTGGAAACCTCAAGAGAAAACTACACATAAAACAGCACTATAAAATCTACCTGTCGAcactgtaacaaaataaaattgtcttgATCAAAAGACACggagtgctcctaatctcagctcgttacctgtataaaagacacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccatcgccaagcagcttggtgagaaggtgacagcaattggtgcgattattcgcgaatggaagaaacacaaaataactgtcattctccctcggtctggggctccat

Function

GO: NA

KEGG:

id description
ko00512 Mucin type O-glycan biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU129564 True 678 lncRNA 0.41 2 7373675 7384727

Neighbor

gene id symbol gene type direction distance location
AMCG00011004 NA coding upstream 77799 7291271 ~ 7295876 (+)
AMCG00011002 scmh1 coding upstream 87404 7271184 ~ 7286271 (+)
AMCG00010999 NA coding upstream 142974 7229370 ~ 7230701 (+)
AMCG00011000 NA coding upstream 169783 7202978 ~ 7203892 (+)
AMCG00011001 med18,LOC106605104 coding upstream 174359 7190221 ~ 7199316 (+)
AMCG00011007 NA coding downstream 170349 7555076 ~ 7559008 (+)
AMCG00011011 NA coding downstream 201539 7586266 ~ 7604072 (+)
AMCG00011010 NA coding downstream 226551 7611278 ~ 7618265 (+)
AMCG00011014 NA coding downstream 381552 7766279 ~ 7767019 (+)
AMCG00011015 NA coding downstream 384291 7769018 ~ 7778092 (+)
G103670 NA non-coding upstream 64066 7308605 ~ 7309609 (+)
G103599 NA non-coding upstream 411484 6961986 ~ 6962191 (+)
G103567 ppce,LOC107688393,LOC106923076,LOC103154994,LOC107592053,LOC107706142,LOC107654745,LOC106588491 non-coding upstream 446428 6907102 ~ 6927247 (+)
G103541 NA non-coding upstream 736487 6636963 ~ 6637188 (+)
G103540 NA non-coding upstream 743685 6628488 ~ 6629990 (+)
G103688 NA non-coding downstream 5275 7390002 ~ 7452292 (+)
G103678 NA non-coding downstream 10901 7395628 ~ 7398120 (+)
G103698 NA non-coding downstream 72034 7456761 ~ 7461153 (+)
G103761 NA non-coding downstream 239726 7624453 ~ 7627917 (+)
G103797 NA non-coding downstream 465067 7849794 ~ 7850029 (+)
AMCG00010994 NA other upstream 270167 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 452744 6892397 ~ 6920931 (+)
G103542 NA other upstream 731047 6641983 ~ 6642628 (+)
AMCG00010979 NA other upstream 978191 6387036 ~ 6395484 (+)
AMCG00010922 NA other upstream 2731272 4634472 ~ 4642403 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other downstream 1163636 8548363 ~ 8552605 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 2145747 9530474 ~ 9549520 (+)
AMCG00011089 csmd2 other downstream 2818890 10203617 ~ 10271863 (+)
G104273 NA other downstream 3433961 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 4259290 11644017 ~ 11651021 (+)

Expression


Co-expression Network