AMCG00011007


Basic Information

Item Value
gene id AMCG00011007
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 7555076 ~ 7559008 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011007
CACAAAGTTATAAAGAACGTGTCCTCCATTCCCACCAAATACCAGACAGTGGTCATCTGCAACACAGAGAACAGAGGTTTCTCCTCACAAACCAAAAGGTTCCTTGCTGAAAACACTCAGAATGAAAATCCAGGTCCAGGCTCTTACATCACACACTGGCCTGCTGAGACCTGCAGCTCCTCCTTCTCAAAGAAAGGGACTGGAGGTTTGGCATCCAAAACGGCCAGAATGCCCAGGAATGCTGTTCGGATCATTCCCGCTCCGAATGCCTACACGGTGCCAACTGCAATGCTGTCCAGAAAGAACTTCAGTCTGGGGAATTCCAGCATGTTTCAGCAGCCGATTGCTGTTAAGGTGTCTTTCAGTGGGATTGAGAAGAACAGCACTGTCCCTGCTAATCTGTCAAGTACATTCAGGAACGCTGGAAGAAAATGTCATCTTTTCATGCTGGCTGGCTGGATCTTCATTTCAGGCCATTACCAAGTGAATGACGCCCTCACAAAGGAAGCACCAAAGGTTCCAGTCTCTTGTTTCAAGTCCAACTCTGAGCGGATCCAGTTGACTGTACCAGCCTTGGGTCCTGGCCCTGGAGCCTACAGTCCCTATGAGGCACCCGAACCCGTGAAGAGGACAACCTTTCCgAAGAGGCATTATTTGTGTATATCCGCACCTCCAATACCAGTCCCCAAGACCCCCCCTCTCCCTGGGCCGGGCCAGTATGACATTGTTAACTATGAAGGACCGGCCAGACACTACATGTCAAGTGCGGTATTCTTGTCCAACACAAGCCGGTGGACTGGAGGCACACATGAAAAGGATCTGCCTGGACCAGgtttctATCAGCCAGAGAAGCCATTGAAACAATCCTTCCTGTACAATTTCTCTAATAAATGGATTCCTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011007 True 903 mRNA 0.50 7 7555076 7559008

Neighbor

gene id symbol gene type direction distance location
AMCG00011004 NA coding upstream 259200 7291271 ~ 7295876 (+)
AMCG00011002 scmh1 coding upstream 268805 7271184 ~ 7286271 (+)
AMCG00010999 NA coding upstream 324375 7229370 ~ 7230701 (+)
AMCG00011000 NA coding upstream 351184 7202978 ~ 7203892 (+)
AMCG00011001 med18,LOC106605104 coding upstream 355760 7190221 ~ 7199316 (+)
AMCG00011011 NA coding downstream 27258 7586266 ~ 7604072 (+)
AMCG00011010 NA coding downstream 52270 7611278 ~ 7618265 (+)
AMCG00011014 NA coding downstream 207271 7766279 ~ 7767019 (+)
AMCG00011015 NA coding downstream 210010 7769018 ~ 7778092 (+)
AMCG00011016 NA coding downstream 408332 7967340 ~ 7973727 (+)
G103698 NA non-coding upstream 93923 7456761 ~ 7461153 (+)
G103688 NA non-coding upstream 102784 7390002 ~ 7452292 (+)
G103678 NA non-coding upstream 156956 7395628 ~ 7398120 (+)
G103684 NA non-coding upstream 170349 7373675 ~ 7384727 (+)
G103670 NA non-coding upstream 245467 7308605 ~ 7309609 (+)
G103761 NA non-coding downstream 65445 7624453 ~ 7627917 (+)
G103797 NA non-coding downstream 290786 7849794 ~ 7850029 (+)
G103800 hdac1,LOC107562876,LOC108272688,LOC107745719,LOC107584281 non-coding downstream 426076 7985084 ~ 7987913 (+)
G103823 fam167b,LOC108234384,LOC101067225,LOC105925981 non-coding downstream 473721 8032729 ~ 8034693 (+)
G103850 NA non-coding downstream 502271 8061279 ~ 8069695 (+)
AMCG00010994 NA other upstream 451568 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 634145 6892397 ~ 6920931 (+)
G103542 NA other upstream 912448 6641983 ~ 6642628 (+)
AMCG00010979 NA other upstream 1159592 6387036 ~ 6395484 (+)
AMCG00010922 NA other upstream 2912673 4634472 ~ 4642403 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other downstream 989355 8548363 ~ 8552605 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 1971466 9530474 ~ 9549520 (+)
AMCG00011089 csmd2 other downstream 2644609 10203617 ~ 10271863 (+)
G104273 NA other downstream 3259680 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 4085009 11644017 ~ 11651021 (+)

Expression


Co-expression Network