G104512


Basic Information

Item Value
gene id G104512
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11977236 ~ 11978365 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130681
CACGAACCCAACCAGCCTTATCTCGTCACACAGGGCTGCGCGGTGCTCGTGTATGGAAGCCCCTCGCCTGCACCCTGGTGACGGGGAGGCTGGAACCAGTCTCGGTTCGGCCTGGGGACGAAGCTCCAATCGTTGTGCCAGGTGTCCTCGCCATTCATGCAAATGTTTCTATAGATGTATAAGTTGTGTTAACTAGGTGTTTTCGGTGTGAGACTATTTCCTACAGTGGAAATGGATCCGGGAACTGTTCTATGGCGGGCACTATCGTATTCTACAGCGATGGCTGGAGTTGATGGTTTGCAAAACCCGGCCTGGGTCAGGCAACACGGGACCGGAGTCTGGGGCACGTACTGTGTTCTGGACAAAACCACGAGTGCGTCCCGGCCCAGCTCACACTCGGCGCTGCGACGGGGAGGTGCTTCGGCGCCATGCGGAGCCGGACTGTGGGGTAAAGATAAAGGAGAGTCGATTGCCTGACAAATAACAGCAGCGTGATAAGCGTGGTCTGGTGCCCGCTATCAAAAACAACACCGTCGTGACGCAGCTTAAAACAGCATGCCACACAACTGAGCGGCGCATGCGCACGAATTTACACTCGTAGCGGTTCTGCGCGACAGAGGACGGTTGCCAGGGTGACATATGTGTGTCCTGTTACAGTGGTGTGCGCATGCGCAGCGCATTGAAAACTCGGAGCCCTGACACGTTACAAAAACACGTTCATCCCAAATTCAGCTACTTCCGCCGGCAACCAGCATCCGGCCTGAGTCTACAATGCGCTCTGCTGAGCAGGCCTGGCATAGCTGCTGTGTAACGGTCATGTTTTACAATTCGCGATGCCTTTTAATGCATCGGATTGTTTTGATCTTGTTTCttttagtttgttgtttttcctttatgtGATGCATTATCCGTTAATTATCAATGaatctgtttttgtaaaattTTGTTGTCAGTTTGCCATTTTATCACGAATTTGTTTTGATGATTTTACACACTTGTTTCTtgagtttaatttgtattttggtttaatcACGTTaggatttaaaaaagttttaagtgattttagaatttgattttttttatcataagtattaaaatgttttttattttgtaatgtaaaatacttttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130681 True 1130 lncRNA 0.47 1 11977236 11978365

Neighbor

gene id symbol gene type direction distance location
AMCG00011121 eef1a1l2,LOC107589444,LOC107706209,LOC105892153,LOC105027913 coding upstream 10241 11962398 ~ 11966995 (+)
AMCG00011122 NA coding upstream 31235 11943599 ~ 11946001 (+)
AMCG00011116 NA coding upstream 138207 11833844 ~ 11839029 (+)
AMCG00011111 NA coding upstream 335009 11638002 ~ 11642227 (+)
AMCG00011108 NA coding upstream 390030 11574540 ~ 11587206 (+)
AMCG00011120 ppt1,LOC107696568,LOC107591677,LOC107697049,LOC107706207,LOC107589449 coding downstream 8497 11986862 ~ 11988912 (+)
AMCG00011133 NA coding downstream 55932 12034297 ~ 12038373 (+)
AMCG00011134 NA coding downstream 66670 12045035 ~ 12050580 (+)
AMCG00011142 NA coding downstream 165497 12143862 ~ 12148439 (+)
AMCG00011146 NA coding downstream 306507 12284872 ~ 12300928 (+)
G104477 NA non-coding upstream 27524 11948240 ~ 11949712 (+)
G104489 NA non-coding upstream 44950 11930208 ~ 11932286 (+)
G104488 NA non-coding upstream 47222 11929213 ~ 11930014 (+)
G104483 NA non-coding upstream 56039 11919874 ~ 11921197 (+)
G104480 NA non-coding upstream 59089 11917688 ~ 11918147 (+)
G104596 NA non-coding downstream 173000 12151365 ~ 12151633 (+)
G104603 NA non-coding downstream 271894 12250259 ~ 12254820 (+)
G104609 NA non-coding downstream 281247 12259612 ~ 12259861 (+)
G104627 NA non-coding downstream 354963 12333328 ~ 12334214 (+)
G104666 NA non-coding downstream 451131 12429496 ~ 12434556 (+)
G104435 NA other upstream 133147 11842129 ~ 11844089 (+)
AMCG00011115 NA other upstream 166414 11808846 ~ 11810822 (+)
G104382 NA other upstream 305896 11666198 ~ 11671340 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other upstream 326215 11644017 ~ 11651021 (+)
G104273 NA other upstream 1157813 10818688 ~ 10819423 (+)
G104550 NA other downstream 88129 12066494 ~ 12067337 (+)
AMCG00011141 LOC567622,LOC108413244,LOC103367052,LOC101466533,LOC107379323 other downstream 89086 12067451 ~ 12140465 (+)
G104694 NA other downstream 546995 12525360 ~ 12527031 (+)
G104719 NA other downstream 631764 12610129 ~ 12619055 (+)
AMCG00011163 reep2,LOC107557670,LOC107588406 other downstream 692011 12670376 ~ 12679429 (+)

Expression


Co-expression Network